RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 CLEC17AQ6ZS10 378 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
GAPDH-210ENST00000496049 MMP19Q99542 508 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
GAPDH-210ENST00000496049 A1CFQ9NQ94 594 aaKnown RBP17.05■□□□□ 0.32
GAPDH-210ENST00000496049 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 SRRDQ9UH36 339 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 CPA4Q9UI42 421 aa17.05■□□□□ 0.32
GAPDH-210ENST00000496049 MGAMO43451 1857 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 FIBPO43427 364 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 FCER1AP12319 257 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
GAPDH-210ENST00000496049 SYN1P17600 705 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 SREBF1P36956 1147 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 UBXN2AP68543 259 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
GAPDH-210ENST00000496049 STK38Q15208 465 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 LETM2Q2VYF4 491 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
GAPDH-210ENST00000496049 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 SPATA32Q96LK8 384 aa17.04■□□□□ 0.32
GAPDH-210ENST00000496049 LAMA2P24043 3122 aaKnown RBP17.03■□□□□ 0.32
GAPDH-210ENST00000496049 ZNF236Q9UL36 1845 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 FAM205CA6NFA0 338 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 B4DLN1 442 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 PEX10O60683 326 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 YEATS4O95619 227 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 BCRP11274 1271 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 PTMSP20962 102 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
GAPDH-210ENST00000496049 PSMC4P43686 418 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 USP11P51784 963 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 ARHGAP4P98171 946 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
GAPDH-210ENST00000496049 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
GAPDH-210ENST00000496049 ABRAQ8N0Z2 381 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 TRIM47Q96LD4 638 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 ADD3Q9UEY8 706 aaKnown RBP17.03■□□□□ 0.32
GAPDH-210ENST00000496049 CNPY2Q9Y2B0 182 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 MYH7BA7E2Y1 1941 aa17.03■□□□□ 0.32
GAPDH-210ENST00000496049 FRMPD4Q14CM0 1322 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 STRNO43815 780 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 CCNT1O60563 726 aaKnown RBP17.02■□□□□ 0.32
GAPDH-210ENST00000496049 SGPL1O95470 568 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 ZNF76P36508 570 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
GAPDH-210ENST00000496049 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
GAPDH-210ENST00000496049 Q3C1V9 767 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 ARHGEF16Q5VV41 709 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 NSUN6Q8TEA1 469 aaKnown RBP17.02■□□□□ 0.32
GAPDH-210ENST00000496049 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 USP28Q96RU2 1077 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 RMDN3Q96TC7 470 aa17.02■□□□□ 0.32
GAPDH-210ENST00000496049 LAD1O00515 517 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 NEMFO60524 1076 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
GAPDH-210ENST00000496049 MCM7P33993 719 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 PLEKHH3Q7Z736 793 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
GAPDH-210ENST00000496049 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
GAPDH-210ENST00000496049 PORCNQ9H237 461 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 PXMP2Q9NR77 195 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 SLC5A4Q9NY91 659 aa17.01■□□□□ 0.31
GAPDH-210ENST00000496049 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
GAPDH-210ENST00000496049 ELP1O95163 1332 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 TCHHQ07283 1943 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 CCND2P30279 289 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 PCNX4Q63HM2 1172 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 PPP4R3AQ6IN85 833 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 GPR142Q7Z601 462 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 DIS3LQ8TF46 1054 aaKnown RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 EIF4ENIF1Q9NRA8 985 aaKnown RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 COL20A1Q9P218 1284 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
GAPDH-210ENST00000496049 PCDHB6Q9Y5E3 794 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 CLIC4Q9Y696 253 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 LCTP09848 1927 aa17■□□□□ 0.31
GAPDH-210ENST00000496049 LOC102724159A0A0B4J2E5 919 aa16.99■□□□□ 0.31
GAPDH-210ENST00000496049 GOLGA6L4A6NEF3 574 aa16.99■□□□□ 0.31
GAPDH-210ENST00000496049 SPTLC2O15270 562 aa16.99■□□□□ 0.31
GAPDH-210ENST00000496049 CYP3A4P08684 503 aa16.99■□□□□ 0.31
GAPDH-210ENST00000496049 NBR1Q14596 966 aa16.99■□□□□ 0.31
GAPDH-210ENST00000496049 PWP2Q15269 919 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms