RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
APTX-233ENST00000496030 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
APTX-233ENST00000496030 LLPHQ9BRT6 129 aaKnown RBP13.68□□□□□ -0.22
APTX-233ENST00000496030 ZMYND12Q9H0C1 365 aa13.68□□□□□ -0.22
APTX-233ENST00000496030 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
APTX-233ENST00000496030 ORC3Q9UBD5 711 aaPredicted RBP13.68□□□□□ -0.22
APTX-233ENST00000496030 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
APTX-233ENST00000496030 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 DNERQ8NFT8 737 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 SH3GLB2Q9NR46 395 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 GJB4Q9NTQ9 266 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
APTX-233ENST00000496030 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 CYBAP13498 195 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 RTP1P59025 263 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 SMAD3P84022 425 aaKnown RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 CUL4AQ13619 759 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 UBE2SQ16763 222 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 SNX21Q969T3 373 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
APTX-233ENST00000496030 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 ADD3Q9UEY8 706 aaKnown RBP13.66□□□□□ -0.22
APTX-233ENST00000496030 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 LRRC37A2A6NM11 1700 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 TMEM265A0A087WTH1 108 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 ASB14A6NK59 587 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 ADCY7P51828 1080 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.22
APTX-233ENST00000496030 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 NSUN6Q8TEA1 469 aaKnown RBP13.65□□□□□ -0.22
APTX-233ENST00000496030 CUL5Q93034 780 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 FAM122AQ96E09 287 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 NRBP1Q9UHY1 535 aa13.65□□□□□ -0.22
APTX-233ENST00000496030 M0R2N6 131 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 NR3C2P08235 984 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
APTX-233ENST00000496030 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 TAPT1Q6NXT6 567 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
APTX-233ENST00000496030 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
APTX-233ENST00000496030 BADQ92934 168 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
APTX-233ENST00000496030 CHD9Q3L8U1 2897 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
APTX-233ENST00000496030 ADCY6O43306 1168 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 EDIL3O43854 480 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 RGS20O76081 388 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
APTX-233ENST00000496030 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
APTX-233ENST00000496030 GRIN2CQ14957 1233 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 PGM5Q15124 567 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 TMEM63BQ5T3F8 832 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 CCDC12Q8WUD4 166 aaPredicted RBP13.63□□□□□ -0.23
APTX-233ENST00000496030 CRYGNQ8WXF5 182 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 GLT8D2Q9H1C3 349 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 C6orf50Q9HD87 102 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 PDGFCQ9NRA1 345 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 PCDHA6Q9UN73 950 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 REV3LO60673 3130 aa13.63□□□□□ -0.23
APTX-233ENST00000496030 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 GNA11P29992 359 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 NLRP5P59047 1200 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 WASF1Q92558 559 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
APTX-233ENST00000496030 PGBD1Q96JS3 809 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 VTA1Q9NP79 307 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 PRDM5Q9NQX1 630 aaPredicted RBP13.62□□□□□ -0.23
APTX-233ENST00000496030 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
APTX-233ENST00000496030 PCDHA4Q9UN74 947 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 KIAA1217Q5T5P2 1943 aa13.62□□□□□ -0.23
APTX-233ENST00000496030 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms