RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
MRPL55-233ENST00000495899 NR3C2P08235 984 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 HOXA13P31271 388 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-233ENST00000495899 ACLYP53396 1101 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 KCNA10Q16322 511 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 GNASQ5JWF2 1037 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 SLC39A5Q6ZMH5 540 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-233ENST00000495899 IL17RAQ96F46 866 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
MRPL55-233ENST00000495899 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-233ENST00000495899 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
MRPL55-233ENST00000495899 NID2Q14112 1375 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 H0YGN5 161 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 hCG_1984214I3L0E3 225 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 CDC27P30260 824 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 ADD1P35611 737 aaKnown RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 TOB2Q14106 344 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 SNX17Q15036 470 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 LRRC26Q2I0M4 334 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 TLK2Q86UE8 772 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 VSIG10LQ86VR7 867 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 ZNF713Q8N859 430 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 CUL5Q93034 780 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 PDCD2LQ9BRP1 358 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 PSTPIP2Q9H939 334 aa14.25□□□□□ -0.13
MRPL55-233ENST00000495899 RBM27Q9P2N5 1060 aaKnown RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-233ENST00000495899 SMCHD1A6NHR9 2005 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 CNTNAP5Q8WYK1 1306 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 MEIS2O14770 477 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 CTAGE5O15320 804 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 ZEB2O60315 1214 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
MRPL55-233ENST00000495899 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
MRPL55-233ENST00000495899 TTLL4Q14679 1199 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 FERMT2Q96AC1 680 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 UPF3BQ9BZI7 483 aaKnown RBP14.24□□□□□ -0.13
MRPL55-233ENST00000495899 PDRG1Q9NUG6 133 aa14.24□□□□□ -0.13
MRPL55-233ENST00000495899 ELP1O95163 1332 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 A0A1W2PQ45 241 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-233ENST00000495899 A0A1W2PQY0 241 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 hCG_1642624A0A1W2PR95 340 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 STAM2O75886 525 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 CABYRO75952 493 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 ASGR1P07306 291 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 PGM5Q15124 567 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
MRPL55-233ENST00000495899 PPP1R18Q6NYC8 613 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 XRRA1Q6P2D8 792 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 C7orf61Q8IZ16 206 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 GLT1D1Q96MS3 346 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 GLT8D2Q9H1C3 349 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 METRNQ9UJH8 293 aa14.23□□□□□ -0.13
MRPL55-233ENST00000495899 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-233ENST00000495899 FRMPD4Q14CM0 1322 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 PRPF3O43395 683 aaKnown RBP14.22□□□□□ -0.13
MRPL55-233ENST00000495899 TGFB3P10600 412 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 CCND2P30279 289 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 CPT1AP50416 773 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 ANKRD1Q15327 319 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 BRDTQ58F21 947 aaPredicted RBP14.22□□□□□ -0.13
MRPL55-233ENST00000495899 TMEM63BQ5T3F8 832 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 USP17L6PQ6QN14 398 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 SEZ6LQ9BYH1 1024 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 STARD7Q9NQZ5 370 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 BARHL2Q9NY43 387 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 BOLA1Q9Y3E2 137 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 PDE4DIPQ5VU43 2346 aa14.22□□□□□ -0.13
MRPL55-233ENST00000495899 KPNA6O60684 536 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 IFNAR1P17181 557 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 NAPAP54920 295 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 RTP1P59025 263 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 BEX3Q00994 111 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 NTRK3Q16288 839 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 GPKOWQ92917 476 aaPredicted RBP eCLIP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 TOX2Q96NM4 488 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 RIC8AQ9NPQ8 531 aa14.21□□□□□ -0.13
MRPL55-233ENST00000495899 DDX41Q9UJV9 622 aaKnown RBP14.21□□□□□ -0.13
MRPL55-233ENST00000495899 LCTP09848 1927 aa14.21□□□□□ -0.14
MRPL55-233ENST00000495899 FRMPD3Q5JV73 1810 aa14.2□□□□□ -0.14
MRPL55-233ENST00000495899 DNAH12Q6ZR08 3092 aa14.2□□□□□ -0.14
MRPL55-233ENST00000495899 A6NJR5 290 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms