RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 HMGB1P09429 215 aaKnown RBP27.99■■■□□ 2.07
HLA-C-209ENST00000495835 EXOSC10Q01780 885 aaKnown RBP27.99■■■□□ 2.07
HLA-C-209ENST00000495835 LAMC2Q13753 1193 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 SYNE3Q6ZMZ3 975 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 DHX32Q7L7V1 743 aaKnown RBP27.99■■■□□ 2.07
HLA-C-209ENST00000495835 FANCBQ8NB91 859 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 PPP1R12CQ9BZL4 782 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 TRPV6Q9H1D0 765 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 MTMR10Q9NXD2 777 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 MRVI1Q9Y6F6 885 aa27.99■■■□□ 2.07
HLA-C-209ENST00000495835 CASTP20810 708 aaKnown RBP27.98■■■□□ 2.07
HLA-C-209ENST00000495835 CCND2P30279 289 aa27.98■■■□□ 2.07
HLA-C-209ENST00000495835 NBPF20Q3BBV1 942 aa27.98■■■□□ 2.07
HLA-C-209ENST00000495835 SRBD1Q8N5C6 995 aaKnown RBP27.98■■■□□ 2.07
HLA-C-209ENST00000495835 NOC4LQ9BVI4 516 aaKnown RBP27.98■■■□□ 2.07
HLA-C-209ENST00000495835 FRMPD4Q14CM0 1322 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 PIK3CDO00329 1044 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 MMP3P08254 477 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 MYCLP12524 364 aaPredicted RBP27.97■■■□□ 2.07
HLA-C-209ENST00000495835 CSF2RAP15509 400 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 COL9A3Q14050 684 aaPredicted RBP27.97■■■□□ 2.07
HLA-C-209ENST00000495835 DGKDQ16760 1214 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 PSRC1Q6PGN9 363 aaPredicted RBP27.97■■■□□ 2.07
HLA-C-209ENST00000495835 AFG1LQ8WV93 481 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 CUL5Q93034 780 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 IL23AQ9NPF7 189 aa27.97■■■□□ 2.07
HLA-C-209ENST00000495835 MYH7BA7E2Y1 1941 aa27.96■■■□□ 2.07
HLA-C-209ENST00000495835 RGS20O76081 388 aa27.96■■■□□ 2.07
HLA-C-209ENST00000495835 NEFLP07196 543 aa27.96■■■□□ 2.07
HLA-C-209ENST00000495835 CYP2C18P33260 490 aa27.96■■■□□ 2.07
HLA-C-209ENST00000495835 FCHSD1Q86WN1 690 aa27.96■■■□□ 2.07
HLA-C-209ENST00000495835 DHX37Q8IY37 1157 aaKnown RBP27.96■■■□□ 2.07
HLA-C-209ENST00000495835 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.96■■■□□ 2.07
HLA-C-209ENST00000495835 COL6A3P12111 3177 aa27.95■■■□□ 2.07
HLA-C-209ENST00000495835 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-209ENST00000495835 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-209ENST00000495835 PLEKHA8P1O95397 391 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 TMEM240Q5SV17 173 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 XRRA1Q6P2D8 792 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 Q7L0L9 218 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 C16orf59Q7L2K0 433 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 SESTD1Q86VW0 696 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 TEX2Q8IWB9 1127 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 PPTC7Q8NI37 304 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 KCNB2Q92953 911 aa27.95■■■□□ 2.06
HLA-C-209ENST00000495835 RBM28Q9NW13 759 aaKnown RBP27.95■■■□□ 2.06
HLA-C-209ENST00000495835 TMEM265A0A087WTH1 108 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 GNPTABQ3T906 1256 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 ZNF697Q5TEC3 545 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 RASIP1Q5U651 963 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 TMTC3Q6ZXV5 915 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 RASEFQ8IZ41 740 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 RPUSD2Q8IZ73 545 aaKnown RBP27.94■■■□□ 2.06
HLA-C-209ENST00000495835 PIBF1Q8WXW3 757 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 LRRC2Q9BYS8 371 aa27.94■■■□□ 2.06
HLA-C-209ENST00000495835 PPFIA4O75335 1185 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 HOXD8P13378 290 aaPredicted RBP27.93■■■□□ 2.06
HLA-C-209ENST00000495835 RCAN1P53805 252 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 FAM47CQ5HY64 1035 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 MYSM1Q5VVJ2 828 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 APOA5Q6Q788 366 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 SMARCC2Q8TAQ2 1214 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 KATNAL1Q9BW62 490 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 TRMT13Q9NUP7 481 aaKnown RBP27.93■■■□□ 2.06
HLA-C-209ENST00000495835 STXBP5LQ9Y2K9 1186 aa27.93■■■□□ 2.06
HLA-C-209ENST00000495835 MEIS2O14770 477 aa27.92■■■□□ 2.06
HLA-C-209ENST00000495835 EPB41L2O43491 1005 aaKnown RBP27.92■■■□□ 2.06
HLA-C-209ENST00000495835 RXRAP19793 462 aa27.92■■■□□ 2.06
HLA-C-209ENST00000495835 ICAM3P32942 547 aa27.92■■■□□ 2.06
HLA-C-209ENST00000495835 CELF3Q5SZQ8 465 aaKnown RBP27.92■■■□□ 2.06
HLA-C-209ENST00000495835 IL31RAQ8NI17 732 aa27.92■■■□□ 2.06
HLA-C-209ENST00000495835 MTIF3Q9H2K0 278 aaKnown RBP27.92■■■□□ 2.06
HLA-C-209ENST00000495835 PITPNM1O00562 1244 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 FGBP02675 491 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 PFKMP08237 780 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 ADCK5Q3MIX3 580 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 ZNF365Q70YC5 407 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 MICU3Q86XE3 530 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 INPP4AQ96PE3 977 aaPredicted RBP27.91■■■□□ 2.06
HLA-C-209ENST00000495835 PSTPIP2Q9H939 334 aa27.91■■■□□ 2.06
HLA-C-209ENST00000495835 REC8O95072 547 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 MRPS9P82933 396 aaKnown RBP27.9■■■□□ 2.06
HLA-C-209ENST00000495835 PCNX4Q63HM2 1172 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 HERVK_113Q902F9 699 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 KAT2BQ92831 832 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 WNT8AQ9H1J5 351 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 UMODL1Q5DID0 1318 aa27.9■■■□□ 2.06
HLA-C-209ENST00000495835 ZBTB43O43298 467 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 HSPA4P34932 840 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 RFC2P35250 354 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 CCL23P55773 120 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 BFSP2Q13515 415 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 ERICH6BQ5W0A0 696 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 USP17L6PQ6QN14 398 aa27.89■■■□□ 2.06
HLA-C-209ENST00000495835 CMTR1Q8N1G2 835 aaKnown RBP27.89■■■□□ 2.06
HLA-C-209ENST00000495835 GGPS1O95749 300 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 F2P00734 622 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 CYP2C9P11712 490 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 SP2Q02086 613 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 NEDD9Q14511 834 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms