RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 FAM47CQ5HY64 1035 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 VSIG10LQ86VR7 867 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 NOC4LQ9BVI4 516 aaKnown RBP16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 WNT8AQ9H1J5 351 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 SORBS3O60504 671 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 KPNA6O60684 536 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 ADCK5Q3MIX3 580 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 FAM109BQ6ICB4 259 aaPredicted RBP16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 TCEANC2Q96MN5 208 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 NEK1Q96PY6 1258 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 MYH6P13533 1939 aa16.48■□□□□ 0.23
RPRD1B-206ENST00000495457 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 GNAQP50148 359 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 ZNF697Q5TEC3 545 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 GUCD1Q96NT3 240 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
RPRD1B-206ENST00000495457 CCND2P30279 289 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 SP2Q02086 613 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 NFRKBQ6P4R8 1299 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 USP17L6PQ6QN14 398 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 KAT2BQ92831 832 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 SCLYQ96I15 445 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 IL23AQ9NPF7 189 aa16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 SEC63Q9UGP8 760 aaKnown RBP16.46■□□□□ 0.23
RPRD1B-206ENST00000495457 SUPT20HL2P0C7V6 817 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 CALM1P0DP23 149 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 CALM2P0DP24 149 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 CALM3P0DP25 149 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 MRPS9P82933 396 aaKnown RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 LAMC2Q13753 1193 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 PSRC1Q6PGN9 363 aaPredicted RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 DHX37Q8IY37 1157 aaKnown RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 EMID1Q96A84 441 aaPredicted RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 VWCEQ96DN2 955 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 TTYH1Q9H313 450 aaPredicted RBP16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 STXBP5LQ9Y2K9 1186 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
RPRD1B-206ENST00000495457 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 GRXCR1A8MXD5 290 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 MEIS2O14770 477 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 GGPS1O95749 300 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 ZNF286BP0CG31 522 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 DGKDQ16760 1214 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 HSDL1Q3SXM5 330 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 CELF3Q5SZQ8 465 aaKnown RBP16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 MYSM1Q5VVJ2 828 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 PPTC7Q8NI37 304 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 SCN10AQ9Y5Y9 1956 aa16.44■□□□□ 0.22
RPRD1B-206ENST00000495457 COL6A3P12111 3177 aa16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 PTPN11Q06124 597 aaPredicted RBP16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 GDF6Q6KF10 455 aaPredicted RBP16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 KCNV1Q6PIU1 500 aa16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 OTOP2Q7RTS6 562 aa16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 SPATA33Q96N06 139 aa16.43■□□□□ 0.22
RPRD1B-206ENST00000495457 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 FGBP02675 491 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 CPA1P15085 419 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 DNAJB2P25686 324 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 PBX2P40425 430 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 PSEN2P49810 448 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 KRT32Q14532 448 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 PTGISQ16647 500 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 HERVK_113Q902F9 699 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 CUL5Q93034 780 aa16.42■□□□□ 0.22
RPRD1B-206ENST00000495457 INPP4AQ96PE3 977 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms