RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 NIPA1Q7RTP0 329 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
PKP4-215ENST00000494945 LENG9Q96B70 501 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 RMDN3Q96TC7 470 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
PKP4-215ENST00000494945 MROH8Q9H579 483 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 KCNMB3Q9NPA1 279 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 A1CFQ9NQ94 594 aaKnown RBP12.47□□□□□ -0.41
PKP4-215ENST00000494945 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 ABT1Q9ULW3 272 aaKnown RBP12.47□□□□□ -0.41
PKP4-215ENST00000494945 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 MARCH6O60337 910 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 CYP2C8P10632 490 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 TXKP42681 527 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 ZNF445P59923 1031 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 CCNA1P78396 465 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 PDIA5Q14554 519 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 PGM5Q15124 567 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 CEP55Q53EZ4 464 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 PRR16Q569H4 304 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 ETNPPLQ8TBG4 499 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 NSUN6Q8TEA1 469 aaKnown RBP12.46□□□□□ -0.41
PKP4-215ENST00000494945 HAS1Q92839 578 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 PTPN18Q99952 460 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 PDCD2LQ9BRP1 358 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 CCSER1Q9C0I3 900 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 TNMDQ9H2S6 317 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 USP25Q9UHP3 1055 aa12.46□□□□□ -0.41
PKP4-215ENST00000494945 CASP8AP2Q9UKL3 1982 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 MEIS1O00470 390 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 BCRP11274 1271 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 ERCC3P19447 782 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 EIF2AK2P19525 551 aaKnown RBP12.45□□□□□ -0.42
PKP4-215ENST00000494945 CCND2P30279 289 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 UBA7P41226 1012 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 TECP42680 631 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 UBXN2AP68543 259 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 ARHGEF16Q5VV41 709 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 RBM43Q6ZSC3 357 aaKnown RBP12.45□□□□□ -0.42
PKP4-215ENST00000494945 USP49Q70CQ1 688 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
PKP4-215ENST00000494945 DNERQ8NFT8 737 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 EPSTI1Q96J88 318 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
PKP4-215ENST00000494945 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
PKP4-215ENST00000494945 SYCE3A1L190 88 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
PKP4-215ENST00000494945 MSH4O15457 936 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 POLR2DO15514 142 aaKnown RBP12.44□□□□□ -0.42
PKP4-215ENST00000494945 SLC26A4O43511 780 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 PEX10O60683 326 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 STAM2O75886 525 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 YY1P25490 414 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 Q3C1V9 767 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 PLA2G4DQ86XP0 818 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 IL31RAQ8NI17 732 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 SLC5A5Q92911 643 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 IWS1Q96ST2 819 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 JADE2Q9NQC1 790 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 ADD3Q9UEY8 706 aaKnown RBP12.44□□□□□ -0.42
PKP4-215ENST00000494945 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 CCDC39Q9UFE4 941 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 HOOK1Q9UJC3 728 aaKnown RBP12.44□□□□□ -0.42
PKP4-215ENST00000494945 UBIAD1Q9Y5Z9 338 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
PKP4-215ENST00000494945 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 B4DLN1 442 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKP4-215ENST00000494945 NR3C2P08235 984 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 MRPS9P82933 396 aaKnown RBP12.43□□□□□ -0.42
PKP4-215ENST00000494945 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
PKP4-215ENST00000494945 CAMK4Q16566 473 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 CABP7Q86V35 215 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
PKP4-215ENST00000494945 FAM133AQ8N9E0 248 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms