RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	VTI1A	Q96AJ9	217 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	MTG1	Q9BT17	334 aa	Predicted RBP	11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	MYL10	Q9BUA6	226 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	AGXT2	Q9BYV1	514 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	RBM28	Q9NW13	759 aa	Known RBP	11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	PPP4R2	Q9NY27	417 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	SEC63	Q9UGP8	760 aa	Known RBP	11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	DDX41	Q9UJV9	622 aa	Known RBP	11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	hCG_1984214	I3L0E3	225 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	MEIS2	O14770	477 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	PLEKHA8P1	O95397	391 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	EIF2AK2	P19525	551 aa	Known RBP	11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	PTGS1	P23219	599 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	ICAM3	P32942	547 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	FPGS	Q05932	587 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	FUT2	Q10981	343 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	SYNE3	Q6ZMZ3	975 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	SESTD1	Q86VW0	696 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	ZNF713	Q8N859	430 aa	Predicted RBP	11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	INPP4A	Q96PE3	977 aa	Predicted RBP	11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	NID2	Q14112	1375 aa		11.87	□□□□□ -0.51
NEPRO-222	ENST00000494891	MMP3	P08254	477 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	SUPT20HL2	P0C7V6	817 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	CCND2	P30279	289 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	HOXA13	P31271	388 aa	Predicted RBP	11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	EVC	P57679	992 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	LAMC2	Q13753	1193 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	LY6K	Q17RY6	165 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	SEPT14	Q6ZU15	432 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	PPTC7	Q8NI37	304 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	COPS5	Q92905	334 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	LRRC2	Q9BYS8	371 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	BRPF3	Q9ULD4	1205 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	SNX14	Q9Y5W7	946 aa		11.86	□□□□□ -0.51
NEPRO-222	ENST00000494891	ZBTB43	O43298	467 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	B4GALT4	O60513	344 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	PPFIA4	O75335	1185 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	MRPS9	P82933	396 aa	Known RBP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	SMAD3	P84022	425 aa	Known RBP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	PPIG	Q13427	754 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	SHH	Q15465	462 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	DGKD	Q16760	1214 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	CELF3	Q5SZQ8	465 aa	Known RBP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	RASIP1	Q5U651	963 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	MYSM1	Q5VVJ2	828 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	PCNX4	Q63HM2	1172 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	PPP1R18	Q6NYC8	613 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	MICU3	Q86XE3	530 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	TMEM199	Q8N511	208 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	IL31RA	Q8NI17	732 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	CUL5	Q93034	780 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	LRCH3	Q96II8	777 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	NOC4L	Q9BVI4	516 aa	Known RBP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	MRVI1	Q9Y6F6	885 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	CNTNAP5	Q8WYK1	1306 aa		11.85	□□□□□ -0.51
NEPRO-222	ENST00000494891	CCDC196	A0A1B0GTZ2	297 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	HAS3	O00219	553 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	F2	P00734	622 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	MYL3	P08590	195 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	RXRA	P19793	462 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	CAST	P20810	708 aa	Known RBP	11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	PSMA5	P28066	241 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	EPHB4	P54760	987 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	PSMC6	P62333	389 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	RTN1	Q16799	776 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	NBPF20	Q3BBV1	942 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	GNPTAB	Q3T906	1256 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	C9orf50	Q5SZB4	431 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	FCHSD1	Q86WN1	690 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	AFG1L	Q8WV93	481 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	KAT2B	Q92831	832 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	SENP7	Q9BQF6	1050 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	TM6SF1	Q9BZW5	370 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	HIPK3	Q9H422	1215 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	PSTPIP2	Q9H939	334 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	MYH7B	A7E2Y1	1941 aa		11.84	□□□□□ -0.51
NEPRO-222	ENST00000494891	COL6A3	P12111	3177 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	TMEM265	A0A087WTH1	108 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	SPATA31C2	B4DYI2	1134 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	PITPNM1	O00562	1244 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	FIBP	O43427	364 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	MYCL	P12524	364 aa	Predicted RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	UBA1	P22314	1058 aa	Known RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	RPS6KB1	P23443	525 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	RBL2	Q08999	1139 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	USP17L6P	Q6QN14	398 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	BLOC1S2	Q6QNY1	142 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	C16orf59	Q7L2K0	433 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	DHX37	Q8IY37	1157 aa	Known RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	CMTR1	Q8N1G2	835 aa	Known RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	SMARCC2	Q8TAQ2	1214 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	JAKMIP1	Q96N16	626 aa	Known RBP	11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	KATNAL1	Q9BW62	490 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	USP26	Q9BXU7	913 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	GLT8D2	Q9H1C3	349 aa		11.83	□□□□□ -0.52
NEPRO-222	ENST00000494891	TRPV6	Q9H1D0	765 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms