RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 PCDHA12Q9UN75 941 aa12.93□□□□□ -0.34
HDLBP-245ENST00000494862 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
HDLBP-245ENST00000494862 CSADQ9Y600 493 aa12.93□□□□□ -0.34
HDLBP-245ENST00000494862 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 VWA5AO00534 786 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 ALAS1P13196 640 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 CASP1P29466 404 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 ZNF75DP51815 510 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 OAZ1P54368 228 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 MYL5Q02045 173 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 GRB10Q13322 594 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 CUL4BQ13620 913 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 COG2Q14746 738 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 PRR16Q569H4 304 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 HYIQ5T013 277 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 DLK2Q6UY11 383 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 REPS2Q8NFH8 660 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 LRRC15Q8TF66 581 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 STAMQ92783 540 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-245ENST00000494862 BLZF1Q9H2G9 400 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 ADAMTS5Q9UNA0 930 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
HDLBP-245ENST00000494862 POTEMA6NI47 508 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 RPN1P04843 607 aaKnown RBP12.91□□□□□ -0.34
HDLBP-245ENST00000494862 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
HDLBP-245ENST00000494862 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-245ENST00000494862 AMPD3Q01432 767 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 KCNB1Q14721 858 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-245ENST00000494862 ENOX1Q8TC92 643 aaKnown RBP12.91□□□□□ -0.34
HDLBP-245ENST00000494862 PLIN2Q99541 437 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 C7orf25Q9BPX7 421 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 MYH7BA7E2Y1 1941 aa12.91□□□□□ -0.34
HDLBP-245ENST00000494862 RPTORQ8N122 1335 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 KDM3AQ9Y4C1 1321 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 IGLV3-22A0A075B6J6 115 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 NFIBO00712 420 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 MSH4O15457 936 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
HDLBP-245ENST00000494862 CDC25BP30305 580 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 PPATQ06203 517 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 TKFCQ3LXA3 575 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 SV2BQ7L1I2 683 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 PNMA8AQ86V59 439 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-245ENST00000494862 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-245ENST00000494862 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.34
HDLBP-245ENST00000494862 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 NUDT12Q9BQG2 462 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 GTPBP4Q9BZE4 634 aaKnown RBP12.9□□□□□ -0.34
HDLBP-245ENST00000494862 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 MAF1Q9H063 256 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
HDLBP-245ENST00000494862 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
HDLBP-245ENST00000494862 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 POTECB2RU33 542 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 PPP1R3GB7ZBB8 358 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 HAX1O00165 279 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 CXCL11O14625 94 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 KLRC4O43908 158 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
HDLBP-245ENST00000494862 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-245ENST00000494862 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 ZNF658Q5TYW1 1059 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-245ENST00000494862 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 ERO1BQ86YB8 467 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 RAD54LQ92698 747 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 GJA10Q969M2 543 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 MRFAP1L1Q96HT8 127 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
HDLBP-245ENST00000494862 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
HDLBP-245ENST00000494862 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 MEIS1O00470 390 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 SETQ01105 290 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-245ENST00000494862 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDLBP-245ENST00000494862 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-245ENST00000494862 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
HDLBP-245ENST00000494862 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms