RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 RXRAP19793 462 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 PSMC6P62333 389 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 SHHQ15465 462 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 XRRA1Q6P2D8 792 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 COPS5Q92905 334 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
SCRN1-209ENST00000494620 KATNAL1Q9BW62 490 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 MLXIPQ9HAP2 919 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
SCRN1-209ENST00000494620 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 GOLGA8AA7E2F4 631 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 CD4P01730 458 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 HSPA4P34932 840 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 RCAN1P53805 252 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
SCRN1-209ENST00000494620 NEDD9Q14511 834 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 APOA5Q6Q788 366 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
SCRN1-209ENST00000494620 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
SCRN1-209ENST00000494620 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
SCRN1-209ENST00000494620 KLF18A0A0U1RQI7 1052 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 hCG_1984214I3L0E3 225 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 NOP56O00567 594 aaKnown RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 OPLAHO14841 1288 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 ARIH2O95376 493 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 PTGS1P23219 599 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 BFSP2Q13515 415 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 PSRC1Q6PGN9 363 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 CMTR1Q8N1G2 835 aaKnown RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 CCDC155Q8N6L0 562 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 ZNF713Q8N859 430 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 C7orf31Q8N865 590 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 CDHR1Q96JP9 859 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 TRPV6Q9H1D0 765 aa12.66□□□□□ -0.38
SCRN1-209ENST00000494620 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
SCRN1-209ENST00000494620 MCM3APO60318 1980 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
SCRN1-209ENST00000494620 FIBPO43427 364 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 B4GALT4O60513 344 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 FGBP02675 491 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 MMP3P08254 477 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 ITGB8P26012 769 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 METAP2P50579 478 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCRN1-209ENST00000494620 ARHGAP1Q07960 439 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 C9orf50Q5SZB4 431 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
SCRN1-209ENST00000494620 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 Q6ZUG5 572 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 DEFB123Q8N688 67 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 KCNB2Q92953 911 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 RTEL1Q9NZ71 1219 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
SCRN1-209ENST00000494620 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.39
SCRN1-209ENST00000494620 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 SZT2Q5T011 3432 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 MAFGO15525 162 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 GGPS1O95749 300 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 FOSP01100 380 aaPredicted RBP12.64□□□□□ -0.39
SCRN1-209ENST00000494620 CSF2RAP15509 400 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 ICAM3P32942 547 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 CYP2C18P33260 490 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 NAPAP54920 295 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
SCRN1-209ENST00000494620 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
SCRN1-209ENST00000494620 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
SCRN1-209ENST00000494620 BRF1Q92994 677 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 IL23AQ9NPF7 189 aa12.64□□□□□ -0.39
SCRN1-209ENST00000494620 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms