RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 POLR2AP24928 1970 aaKnown RBP6.71□□□□□ -1.33
PTCD3-219ENST00000494323 LTBP1Q14766 1721 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 SNED1Q8TER0 1413 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 GFRA2O00451 464 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 BBOX1O75936 387 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 ZNF165P49910 485 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 RIPK4P57078 832 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 INPP5AQ14642 412 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 DPP8Q6V1X1 898 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-219ENST00000494323 CYFIP1Q7L576 1253 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 COPS6Q7L5N1 327 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 SAPCD2Q86UD0 394 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 SP8Q8IXZ3 490 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
PTCD3-219ENST00000494323 MYRFLQ96LU7 910 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 ADARB2Q9NS39 739 aaKnown RBP6.71□□□□□ -1.34
PTCD3-219ENST00000494323 CNOT7Q9UIV1 285 aaKnown RBP6.71□□□□□ -1.34
PTCD3-219ENST00000494323 TSPYL4Q9UJ04 414 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 AP4E1Q9UPM8 1137 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 DLG5Q8TDM6 1919 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 ABCC4O15439 1325 aa6.71□□□□□ -1.34
PTCD3-219ENST00000494323 DCDC2CA8MYV0 355 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 HYAL3O43820 417 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-219ENST00000494323 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 MAP2K2P36507 400 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 SOX9P48436 509 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 PARP10Q53GL7 1025 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 CIAPIN1Q6FI81 312 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
PTCD3-219ENST00000494323 LRP10Q7Z4F1 713 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 XAGE3Q8WTP9 111 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.7□□□□□ -1.341e-13■■■□□ 17.4
PTCD3-219ENST00000494323 RTFDC1Q9BY42 306 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-219ENST00000494323 GSX1Q9H4S2 264 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-219ENST00000494323 PICK1Q9NRD5 415 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 GINM1Q9NU53 330 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 TRMT112Q9UI30 125 aaKnown RBP6.7□□□□□ -1.34
PTCD3-219ENST00000494323 EFR3BQ9Y2G0 817 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 TAF1P21675 1872 aa6.7□□□□□ -1.34
PTCD3-219ENST00000494323 TRPM7Q96QT4 1865 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 YDJCA8MPS7 323 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 H7C1D1 291 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 FANCGO15287 622 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
PTCD3-219ENST00000494323 DRD2P14416 443 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 MCM4P33991 863 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PREPP48147 710 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 CDK8P49336 464 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 RING1Q06587 406 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PDE4BQ07343 736 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 KIAA2012Q0VF49 1180 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 TNIP1Q15025 636 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 KRT24Q2M2I5 525 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-219ENST00000494323 CDC37L1Q7L3B6 337 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 DYMQ7RTS9 669 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 NLRP10Q86W26 655 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 C12orf40Q86WS4 652 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 C2CD4AQ8NCU7 369 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-219ENST00000494323 RNF214Q8ND24 703 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 SUPT20HQ8NEM7 779 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 FANCD2OSQ96PS1 177 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 MCOLN1Q9GZU1 580 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 VPS33BQ9H267 617 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PNNQ9H307 717 aaKnown RBP6.69□□□□□ -1.34
PTCD3-219ENST00000494323 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 BRMS1Q9HCU9 246 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PGAP2Q9UHJ9 254 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 STRIP2Q9ULQ0 834 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 LAS1LQ9Y4W2 734 aaKnown RBP6.69□□□□□ -1.34
PTCD3-219ENST00000494323 MAPK8IP3Q9UPT6 1336 aa6.69□□□□□ -1.34
PTCD3-219ENST00000494323 PRAMEF27A3QJZ7 478 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 ATE1O95260 518 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 IMPDH2P12268 514 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 BMP3P12645 472 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 ASPAP45381 313 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 NASPP49321 788 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-219ENST00000494323 PPM1JQ5JR12 505 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 FAM177A1Q8N128 213 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-219ENST00000494323 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 WNT10AQ9GZT5 417 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 C7orf69Q9H7B7 122 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 EHMT1Q9H9B1 1298 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 DBNDD1Q9H9R9 158 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-219ENST00000494323 CSADQ9Y600 493 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 ACTL7BQ9Y614 415 aa6.68□□□□□ -1.34
PTCD3-219ENST00000494323 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 PSMD14O00487 310 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 TMPOP42166 694 aaKnown RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 RGS19P49795 217 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 USP11P51784 963 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 HUNKP57058 714 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms