RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 MAP3K20Q9NYL2 800 aaKnown RBP11.31□□□□□ -0.6
UFD1-210ENST00000494054 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 DDAH1O94760 285 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 RXRAP19793 462 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 PGM5Q15124 567 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 FCHSD1Q86WN1 690 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 CXXC1Q9P0U4 656 aaPredicted RBP11.3□□□□□ -0.6
UFD1-210ENST00000494054 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
UFD1-210ENST00000494054 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 CCDC69A6NI79 296 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 SORBS3O60504 671 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 FGBP02675 491 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 SUPT20HL2P0C7V6 817 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 PBX2P40425 430 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 LIFRP42702 1097 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 SP2Q02086 613 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 PTPN11Q06124 597 aaPredicted RBP11.29□□□□□ -0.6
UFD1-210ENST00000494054 TRAF1Q13077 416 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 NFRKBQ6P4R8 1299 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 OTOP2Q7RTS6 562 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 SLC17A8Q8NDX2 589 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 HERVK_113Q902F9 699 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.63e-7■■□□□ 12.2
UFD1-210ENST00000494054 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
UFD1-210ENST00000494054 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 CTAGE1Q96RT6 745 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 BCAS3Q9H6U6 928 aa11.29□□□□□ -0.6
UFD1-210ENST00000494054 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 RBAK-RBAKDNI3L0D1 243 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
UFD1-210ENST00000494054 DNAJB2P25686 324 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 CCND2P30279 289 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 KIF5BP33176 963 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 LAMC2Q13753 1193 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 DHX37Q8IY37 1157 aaKnown RBP11.28□□□□□ -0.6
UFD1-210ENST00000494054 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
UFD1-210ENST00000494054 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
UFD1-210ENST00000494054 CDC45O75419 566 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 GGPS1O95749 300 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 ZNF286BP0CG31 522 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 UBA1P22314 1058 aaKnown RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 PSEN2P49810 448 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 GRIN2CQ14957 1233 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 PTGISQ16647 500 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 DGKDQ16760 1214 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
UFD1-210ENST00000494054 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 PPTC7Q8NI37 304 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 TIFAQ96CG3 184 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 FRMPD4Q14CM0 1322 aa11.27□□□□□ -0.61
UFD1-210ENST00000494054 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 HAS3O00219 553 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 MEIS2O14770 477 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 PPFIA4O75335 1185 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 CALM1P0DP23 149 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 CALM2P0DP24 149 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 CALM3P0DP25 149 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
UFD1-210ENST00000494054 GNAQP50148 359 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 HIC1Q14526 733 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 RNF20Q5VTR2 975 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 TMTC3Q6ZXV5 915 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 SESTD1Q86VW0 696 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms