RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NEK8Q86SG6 692 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 PHF21AQ96BD5 680 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 FAM81BQ96LP2 452 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 OLFM3Q96PB7 478 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 HACD3Q9P035 362 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF229Q9UJW7 825 aa8.5□□□□□ -1.05
BRCA1-221ENST00000493795 BASP1P80723 227 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 RASSF7Q02833 373 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ADAM9Q13443 819 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TAF1BQ53T94 588 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGAP18Q8N392 663 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SUPT20HQ8NEM7 779 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 RAPGEF5Q92565 580 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 NT5C1BQ96P26 610 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ASPSCR1Q9BZE9 553 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TRIM8Q9BZR9 551 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SNX25Q9H3E2 840 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ATP8A1Q9Y2Q0 1164 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SNX14Q9Y5W7 946 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 IPO5O00410 1097 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 GPAA1O43292 621 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 DDB1Q16531 1140 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 EXOC3L4Q17RC7 722 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ABHD8Q96I13 439 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 AATFQ9NY61 560 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 MAGED2Q9UNF1 606 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 MOCS3O95396 460 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CHGBP05060 677 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SRGAP2CP0DJJ0 459 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 PAMP19021 973 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 PLTPP55058 493 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ALS2CLQ60I27 953 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 HIBCHQ6NVY1 386 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 GFM2Q969S9 779 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 EXOC1LA0A1B0GW35 172 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 PRDM1O75626 825 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 POLR2MP0CAP2 368 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 POLGP54098 1239 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ETF1P62495 437 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ENAHQ8N8S7 591 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ACRBPQ8NEB7 543 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 EPB41L5Q9HCM4 733 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 AOX1Q06278 1338 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 PGRMC1O00264 195 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 MED7O43513 233 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 WDR47O94967 919 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 GSNP06396 782 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 HSPD1P10809 573 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 RANBP1P43487 201 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 HABP4Q5JVS0 413 aaKnown RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ACAD11Q709F0 780 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SLC26A7Q8TE54 656 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF653Q96CK0 615 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 OTUB1Q96FW1 271 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 VPS39Q96JC1 886 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 CDC23Q9UJX2 597 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 EPN1Q9Y6I3 576 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-221ENST00000493795 FPGT-TNNI3KV9GXZ4 949 aa8.49□□□□□ -1.05
BRCA1-221ENST00000493795 SNX2O60749 519 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 NBNO60934 754 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 DEAF1O75398 565 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 KRT7P08729 469 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 PAPOLAP51003 745 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 EIF3BP55884 814 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 NNTQ13423 1086 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ABI1Q8IZP0 508 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 EXT2Q93063 718 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ATP6V0A4Q9HBG4 840 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 VPS54Q9P1Q0 977 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 NFKBIL1Q9UBC1 381 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF215Q9UL58 517 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 MRPL11Q9Y3B7 192 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 PLCH2O75038 1416 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 EYA2O00167 538 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ATP5HO75947 161 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 TCF3P15923 654 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 PFKFB1P16118 471 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 HADHAP40939 763 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 KCNA1Q09470 495 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ADALQ6DHV7 355 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 CCDC127Q96BQ5 260 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 OPTNQ96CV9 577 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 MYL10Q9BUA6 226 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms