RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 STYK1Q6J9G0 422 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 KIAA1328Q86T90 577 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CTAGE6Q86UF2 777 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CTAGE4Q8IX94 777 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CCDC65Q8IXS2 484 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SLC35F6Q8N357 371 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 KIAA0895Q8NCT3 520 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 LRRN4CLQ8ND94 238 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ERMNQ8TAM6 284 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ZNF446Q9NWS9 450 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 GREB1LQ9C091 1923 aaPredicted RBP10.73□□□□□ -0.69
NPHP3-209ENST00000493732 ANKRD31Q8N7Z5 1873 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 ANO9A1A5B4 782 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 USO1O60763 962 aaKnown RBP10.73□□□□□ -0.69
NPHP3-209ENST00000493732 FCER1AP12319 257 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 EHHADHQ08426 723 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 GPS2Q13227 327 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 MYOCDQ8IZQ8 938 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 GMCL1P1Q8NEA9 526 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 DDX12PQ92771 950 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 CEP63Q96MT8 703 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 PARD6BQ9BYG5 372 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 IRX2Q9BZI1 471 aaPredicted RBP10.73□□□□□ -0.69
NPHP3-209ENST00000493732 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 NDST4Q9H3R1 872 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 SEMA6BQ9H3T3 888 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 MYO6Q9UM54 1294 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 FHOD1Q9Y613 1164 aa10.73□□□□□ -0.69
NPHP3-209ENST00000493732 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 H0YIN7 160 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 RNF225M0QZC1 329 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 ENTPD3O75355 529 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 IDEP14735 1019 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 HSPA1LP34931 641 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 FKBP3Q00688 224 aaKnown RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 MIIPQ5JXC2 388 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CCDC122Q5T0U0 273 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CC2D1AQ6P1N0 951 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 TATDN1Q6P1N9 297 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 SUPT20HQ8NEM7 779 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 GMCL1Q96IK5 515 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CCDC42Q96M95 316 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CHP1Q99653 195 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 PLAGL2Q9UPG8 496 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 PITPNM2Q9BZ72 1349 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 POTEMA6NI47 508 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 PPP1R11O60927 126 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 MMP10P09238 476 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 EEF2P13639 858 aaKnown RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 QRICH1Q2TAL8 776 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 WDR59Q6PJI9 974 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 KCTD1Q719H9 257 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 HAS1Q92839 578 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 LUC7LQ9NQ29 371 aaKnown RBP10.72□□□□□ -0.69
NPHP3-209ENST00000493732 GUCA1BQ9UMX6 200 aa10.72□□□□□ -0.69
NPHP3-209ENST00000493732 RBM5P52756 815 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPHP3-209ENST00000493732 ICA1Q05084 483 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 NFIAQ12857 509 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
NPHP3-209ENST00000493732 UBE2SQ16763 222 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 FAM26FQ5R3K3 315 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 DACT2Q5SW24 774 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 TTBK2Q6IQ55 1244 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPHP3-209ENST00000493732 JAKMIP2Q96AA8 810 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 FAM20AQ96MK3 541 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 ANO3Q9BYT9 981 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 PANK4Q9NVE7 773 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 RAB21Q9UL25 225 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.69
NPHP3-209ENST00000493732 MYH4Q9Y623 1939 aa10.71□□□□□ -0.7
NPHP3-209ENST00000493732 EDIL3O43854 480 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 SLC16A2P36021 539 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 VAV2P52735 878 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 AMPD2Q01433 879 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 ABCB5Q2M3G0 1257 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 Q4G0T1 1027 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 PAPD7Q5XG87 772 aaKnown RBP10.7□□□□□ -0.7
NPHP3-209ENST00000493732 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 SYN2Q92777 582 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms