RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 COPS5Q92905 334 aa13.99□□□□□ -0.17
SNRNP25-207ENST00000493672 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
SNRNP25-207ENST00000493672 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
SNRNP25-207ENST00000493672 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
SNRNP25-207ENST00000493672 GRIN2DO15399 1336 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 PIK3CDO00329 1044 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 SOX1O00570 391 aaPredicted RBP13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 TGFB3P10600 412 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 ITGB8P26012 769 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 PSMA5P28066 241 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 PSMC6P62333 389 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 PTPN11Q06124 597 aaPredicted RBP13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 PPIGQ13427 754 aaKnown RBP eCLIP13.98□□□□□ -0.179e-6■■□□□ 12.8
SNRNP25-207ENST00000493672 LAMC2Q13753 1193 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 GNPTABQ3T906 1256 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 XRRA1Q6P2D8 792 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
SNRNP25-207ENST00000493672 SCN10AQ9Y5Y9 1956 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 SHHQ15465 462 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 RTN1Q16799 776 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 NFRKBQ6P4R8 1299 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 AFG1LQ8WV93 481 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 LRCH3Q96II8 777 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 JAKMIP1Q96N16 626 aaKnown RBP13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 ALDH8A1Q9H2A2 487 aaPredicted RBP13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 SNX14Q9Y5W7 946 aa13.97□□□□□ -0.17
SNRNP25-207ENST00000493672 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 CCDC196A0A1B0GTZ2 297 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 RGS20O76081 388 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 MMP3P08254 477 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 DGKDQ16760 1214 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 FBXL16Q8N461 479 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 IL31RAQ8NI17 732 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 PPTC7Q8NI37 304 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
SNRNP25-207ENST00000493672 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 GOLGA8BA8MQT2 603 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 MEIS2O14770 477 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 B4GALT4O60513 344 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 NBPF20Q3BBV1 942 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 FAM47CQ5HY64 1035 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 C9orf50Q5SZB4 431 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 PPP1R12CQ9BZL4 782 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 TRPV6Q9H1D0 765 aa13.95□□□□□ -0.18
SNRNP25-207ENST00000493672 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 PPFIA4O75335 1185 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 ICAM3P32942 547 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 CELF3Q5SZQ8 465 aaKnown RBP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 MYSM1Q5VVJ2 828 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 Q6ZUG5 572 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 NOC4LQ9BVI4 516 aaKnown RBP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 GLT8D2Q9H1C3 349 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 EHMT1Q9H9B1 1298 aa13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
SNRNP25-207ENST00000493672 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 SPDYE3A6NKU9 549 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 FIBPO43427 364 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 GGPS1O95749 300 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 CSF2RAP15509 400 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 UBA1P22314 1058 aaKnown RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 CYP2C18P33260 490 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 EPHB4P54760 987 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 SMAD3P84022 425 aaKnown RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 FUT2Q10981 343 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 NEDD9Q14511 834 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 FAM109BQ6ICB4 259 aaPredicted RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 SESTD1Q86VW0 696 aa13.93□□□□□ -0.18
SNRNP25-207ENST00000493672 BRF1Q92994 677 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms