RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 MRPL11Q9Y3B7 192 aaKnown RBP11.98□□□□□ -0.49
NUDCD3-210ENST00000493613 KAT6AQ92794 2004 aa11.98□□□□□ -0.49
NUDCD3-210ENST00000493613 CFBP00751 764 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 IQCF3P0C7M6 154 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 ARHGAP1Q07960 439 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 BFSP2Q13515 415 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 PTGISQ16647 500 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 TMEM67Q5HYA8 995 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 ATXN2LQ8WWM7 1075 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 FTOQ9C0B1 505 aaKnown RBP eCLIP11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 TTC28Q96AY4 2481 aa11.97□□□□□ -0.49
NUDCD3-210ENST00000493613 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 CA3P07451 260 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 CASTP20810 708 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 CCDC155Q8N6L0 562 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 SLC9A7Q96T83 725 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 AMNQ9BXJ7 453 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 IL25Q9H293 177 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 PXMP2Q9NR77 195 aa11.96□□□□□ -0.49
NUDCD3-210ENST00000493613 OPLAHO14841 1288 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 EIF3JO75822 258 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 NR3C2P08235 984 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 HSD17B4P51659 736 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 DGKDQ16760 1214 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 MICALL1Q8N3F8 863 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 PHOSPHO2Q8TCD6 241 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 ASB2Q96Q27 587 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 PRRC2BQ5JSZ5 2229 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-210ENST00000493613 TNFRSF10AO00220 468 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 ZBTB5O15062 677 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 BAIAP3O94812 1187 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 TRDNQ13061 729 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 SEC23AQ15436 765 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 DHX37Q8IY37 1157 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 C7orf31Q8N865 590 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 KAT2BQ92831 832 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 EMID1Q96A84 441 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 CERS4Q9HA82 394 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 GTF2IRD1Q9UHL9 959 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 PCDHA1Q9Y5I3 950 aa11.94□□□□□ -0.5
NUDCD3-210ENST00000493613 RALGAPA2Q2PPJ7 1873 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 ZNF286BP0CG31 522 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 MYCLP12524 364 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 GSPT1P15170 499 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 SELPP16109 830 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 PDE4AP27815 886 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 KCNJ6P48051 423 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 PSEN2P49810 448 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 GHRHRQ02643 423 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 LAMC2Q13753 1193 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 LRRC8DQ7L1W4 858 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 HOMER1Q86YM7 354 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 PPTC7Q8NI37 304 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 CTAGE1Q96RT6 745 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 LOXHD1Q8IVV2 1947 aa11.93□□□□□ -0.5
NUDCD3-210ENST00000493613 ERICH2A1L162 156 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 PALM3A6NDB9 673 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 RFXAPO00287 272 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 PARNO95453 639 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 F2P00734 622 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 CKBP12277 381 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 TAP1Q03518 808 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 RBL2Q08999 1139 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 TRAF1Q13077 416 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 MFSD10Q14728 455 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 PGM5Q15124 567 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 KIAA0753Q2KHM9 967 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 KCNV1Q6PIU1 500 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 STOX1Q6ZVD7 989 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 ADAMTS19Q8TE59 1207 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 DHX38Q92620 1227 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 PDCD2LQ9BRP1 358 aa11.92□□□□□ -0.5
NUDCD3-210ENST00000493613 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms