RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CNR2P34972 360 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 ZNF761Q86XN6 746 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-218ENST00000493430 TRIM59Q8IWR1 403 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 SEC14L1Q92503 715 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 ACBD3Q9H3P7 528 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 PALD1Q9ULE6 856 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 DUSP10Q9Y6W6 482 aa5.31□□□□□ -1.56
PTCD3-218ENST00000493430 LAMC3Q9Y6N6 1575 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 C8BP07358 591 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 INF2Q27J81 1249 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 ZXDCQ2QGD7 858 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-218ENST00000493430 HHIPL2Q6UWX4 724 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 CD300LDQ6UXZ3 194 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 TEX2Q8IWB9 1127 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 FRS2Q8WU20 508 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 GORASP1Q9BQQ3 440 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 C11orf84Q9BUA3 381 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-218ENST00000493430 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
PTCD3-218ENST00000493430 TIMM13Q9Y5L4 95 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-218ENST00000493430 TOP2AP11388 1531 aaKnown RBP5.29□□□□□ -1.56
PTCD3-218ENST00000493430 SGSM2O43147 1006 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 RPL13P26373 211 aaKnown RBP5.29□□□□□ -1.56
PTCD3-218ENST00000493430 THBS2P35442 1172 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 SLC6A11P48066 632 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 RPL11P62913 178 aaKnown RBP5.29□□□□□ -1.56
PTCD3-218ENST00000493430 KIAA2012Q0VF49 1180 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 ZNF827Q17R98 1081 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 MROH9Q5TGP6 573 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-218ENST00000493430 MILR1Q7Z6M3 343 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 ZC3H18Q86VM9 953 aaKnown RBP5.29□□□□□ -1.56
PTCD3-218ENST00000493430 MIB1Q86YT6 1006 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 KYQ8NBH2 561 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 NPLOC4Q8TAT6 608 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 ADAMTS17Q8TE56 1095 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 GPR20Q99678 358 aa5.29□□□□□ -1.56
PTCD3-218ENST00000493430 ITGB3P05106 788 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 ATF4P18848 351 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-218ENST00000493430 HOXC12P31275 282 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 GTF2A2P52657 109 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 RGL3Q3MIN7 710 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 CEP68Q76N32 757 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 VPS37DQ86XT2 251 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 RIOX2Q8IUF8 465 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 TTLL6Q8N841 843 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 DIO2Q92813 273 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
PTCD3-218ENST00000493430 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 LGR4Q9BXB1 951 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 NGRNQ9NPE2 291 aaKnown RBP5.28□□□□□ -1.56
PTCD3-218ENST00000493430 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-218ENST00000493430 LRP2BPQ9P2M1 347 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 CHD1O14646 1710 aa5.28□□□□□ -1.56
PTCD3-218ENST00000493430 MYO1BO43795 1136 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 INSRRP14616 1297 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 ECI1P42126 302 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 MAGEA10P43363 369 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-218ENST00000493430 CYP4F3Q08477 520 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 SV2CQ496J9 727 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 FAM26FQ5R3K3 315 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 C6orf15Q6UXA7 325 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-218ENST00000493430 FAM124AQ86V42 546 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 ACTR10Q9NZ32 417 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 X6R8D5 127 aa5.27□□□□□ -1.57
PTCD3-218ENST00000493430 SMAD7O15105 426 aaKnown RBP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 CPP00450 1065 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 ITGAVP06756 1048 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 SNRPB2P08579 225 aaKnown RBP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 FPR2P25090 351 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 BCL6P41182 706 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 KCNAB2Q13303 367 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 TNNI3KQ59H18 835 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 LARP1BQ659C4 914 aaKnown RBP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 BORAQ6PGQ7 559 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 STK32CQ86UX6 486 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 FAM178BQ8IXR5 827 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 FAM126BQ8IXS8 530 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 LGI4Q8N135 537 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 Q8N1Y9 231 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 TMEM169Q96HH4 297 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 YIPF4Q9BSR8 244 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 CAPN10Q9HC96 672 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 SMPD4Q9NXE4 827 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 MYRFQ9Y2G1 1151 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 COA3Q9Y2R0 106 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-218ENST00000493430 MRVI1Q9Y6F6 885 aa5.26□□□□□ -1.57
PTCD3-218ENST00000493430 RSF1Q96T23 1441 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-218ENST00000493430 MROH6A6NGR9 719 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 TBX1O43435 398 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 PLATP00750 562 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 SCG5P05408 212 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 SSBP05455 408 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTCD3-218ENST00000493430 KCNJ6P48051 423 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 ITGA1P56199 1179 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms