RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PCDHA4Q9UN74 947 aa19.29■□□□□ 0.68
RER1-208ENST00000493207 MYH7BA7E2Y1 1941 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 EIF3JO75822 258 aaKnown RBP19.28■□□□□ 0.68
RER1-208ENST00000493207 RARBP10826 455 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 TNFAIP2Q03169 654 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 PCNX4Q63HM2 1172 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 BLIDQ8IZY5 108 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 CRISPLD2Q9H0B8 497 aa19.28■□□□□ 0.68
RER1-208ENST00000493207 RBM47A0AV96 593 aaKnown RBP19.27■□□□□ 0.68
RER1-208ENST00000493207 SMPD1P17405 629 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 MRPS9P82933 396 aaKnown RBP19.27■□□□□ 0.68
RER1-208ENST00000493207 TRIM29Q14134 588 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 NPY5RQ15761 445 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 TMEM63BQ5T3F8 832 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 IQSEC1Q6DN90 963 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 GALNT17Q6IS24 598 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 FAM184AQ8NB25 1140 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 DAGLBQ8NCG7 672 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 SCFD2Q8WU76 684 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 WDR11Q9BZH6 1224 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 XPNPEP3Q9NQH7 507 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 RTEL1Q9NZ71 1219 aa19.27■□□□□ 0.68
RER1-208ENST00000493207 K7ELQ4 463 aaPredicted RBP19.26■□□□□ 0.67
RER1-208ENST00000493207 RGS20O76081 388 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 PTGS1P23219 599 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 MCTP2Q6DN12 878 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 XRRA1Q6P2D8 792 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 SNX21Q969T3 373 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 OGDHLQ9ULD0 1010 aa19.26■□□□□ 0.67
RER1-208ENST00000493207 KIAA0100Q14667 2235 aaKnown RBP19.26■□□□□ 0.67
RER1-208ENST00000493207 M0R2N6 131 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 DUSP11O75319 330 aaKnown RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 STAM2O75886 525 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 ARIH2O95376 493 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 PGK1P00558 417 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 MYCNP04198 464 aaPredicted RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 TXNP10599 105 aaKnown RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 SREBF1P36956 1147 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 CUL4AQ13619 759 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 TTLL4Q14679 1199 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 DUSP28Q4G0W2 176 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 GJC2Q5T442 439 aaPredicted RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 KRT40Q6A162 431 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 OXER1Q8TDS5 423 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 C8orf76Q96K31 380 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 GNEQ9Y223 722 aaKnown RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.25■□□□□ 0.67
RER1-208ENST00000493207 MRVI1Q9Y6F6 885 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
RER1-208ENST00000493207 MMP1P03956 469 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 GJB2P29033 226 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 ARHGAP4P98171 946 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 INPP4AQ96PE3 977 aaPredicted RBP19.24■□□□□ 0.67
RER1-208ENST00000493207 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
RER1-208ENST00000493207 DOCK5Q9H7D0 1870 aa19.23■□□□□ 0.67
RER1-208ENST00000493207 KRT2P35908 639 aa19.23■□□□□ 0.67
RER1-208ENST00000493207 GNPTABQ3T906 1256 aa19.23■□□□□ 0.67
RER1-208ENST00000493207 COPS5Q92905 334 aa19.23■□□□□ 0.67
RER1-208ENST00000493207 BRMS1Q9HCU9 246 aa19.23■□□□□ 0.67
RER1-208ENST00000493207 NKRFO15226 690 aaKnown RBP eCLIP19.22■□□□□ 0.673e-10■□□□□ 8.7
RER1-208ENST00000493207 DYNC1LI2O43237 492 aaPredicted RBP19.22■□□□□ 0.67
RER1-208ENST00000493207 ADAMTS4O75173 837 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 ITGB5P18084 799 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
RER1-208ENST00000493207 LRRC41Q15345 812 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 CCDC62Q6P9F0 684 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 KCNV1Q6PIU1 500 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 KRT25Q7Z3Z0 450 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 NLRX1Q86UT6 975 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 ARRDC4Q8NCT1 418 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
RER1-208ENST00000493207 DDX41Q9UJV9 622 aaKnown RBP19.22■□□□□ 0.67
RER1-208ENST00000493207 KIF3AQ9Y496 699 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 UBIAD1Q9Y5Z9 338 aa19.22■□□□□ 0.67
RER1-208ENST00000493207 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 MYADML2A6NDP7 307 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 C6orf222P0C671 652 aaPredicted RBP19.21■□□□□ 0.67
RER1-208ENST00000493207 CAPN2P17655 700 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 ZNF76P36508 570 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 MNX1P50219 401 aaPredicted RBP19.21■□□□□ 0.67
RER1-208ENST00000493207 GJA9P57773 515 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 NR5A1Q13285 461 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 NONOQ15233 471 aaKnown RBP eCLIP19.21■□□□□ 0.673e-7■■■■□ 21.4
RER1-208ENST00000493207 RNF180Q86T96 592 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 DIS3L2Q8IYB7 885 aaKnown RBP19.21■□□□□ 0.67
RER1-208ENST00000493207 ANKLE1Q8NAG6 615 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 OR6J1Q8NGC5 347 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 CYP2W1Q8TAV3 490 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 TBCKQ8TEA7 893 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 DIS3LQ8TF46 1054 aaKnown RBP19.21■□□□□ 0.67
RER1-208ENST00000493207 CRYGNQ8WXF5 182 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 GPRASP2Q96D09 838 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 MXRA8Q9BRK3 442 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 SPC25Q9HBM1 224 aa19.21■□□□□ 0.67
RER1-208ENST00000493207 Q9Y3F1 56 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms