RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 COPB2P35606 906 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 SYKP43405 635 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 Q4G0T1 1027 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 MOV10L1Q9BXT6 1211 aaKnown RBP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 NUP62CLQ9H1M0 184 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 TXNRD2Q9NNW7 524 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 A1CFQ9NQ94 594 aaKnown RBP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 KCNH3Q9ULD8 1083 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 FRMPD4Q14CM0 1322 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 TESPA1A2RU30 521 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 MANSC4A6NHS7 340 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 FAM86B1E9PN63 330 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 MARCH6O60337 910 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 ZNF202O95125 648 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 FAM86B2P0C5J1 330 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 TXKP42681 527 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 UBXN2AP68543 259 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 TMEM266Q2M3C6 531 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 PRR16Q569H4 304 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 NCAPG2Q86XI2 1143 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 SYMPKQ92797 1274 aaKnown RBP15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 RMDN3Q96TC7 470 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 CYP39A1Q9NYL5 469 aa15.92■□□□□ 0.14
PDZRN3-210ENST00000492909 PFASO15067 1338 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 SYCE3A1L190 88 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 GCLCP48506 637 aaPredicted RBP15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 USP49Q70CQ1 688 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 ANKRD35Q8N283 1001 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 AK8Q96MA6 479 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 TAAR1Q96RJ0 339 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 PARK7Q99497 189 aaKnown RBP15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 KCNMB3Q9NPA1 279 aa15.91■□□□□ 0.14
PDZRN3-210ENST00000492909 LCTP09848 1927 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TBX3O15119 743 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 ERCC3P19447 782 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TXLNAP40222 546 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TECP42680 631 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TM4SF4P48230 202 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 ERVK-9P63128 1117 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 ERVK-24P63145 666 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 CAMK4Q16566 473 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 CEP55Q53EZ4 464 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 ARHGEF16Q5VV41 709 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 PCNX4Q63HM2 1172 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 IFNL1Q8IU54 200 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 SLFN12Q8IYM2 578 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 HAS1Q92839 578 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 LENG9Q96B70 501 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 PDLIM2Q96JY6 352 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TNMDQ9H2S6 317 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 PXMP2Q9NR77 195 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 SREBF2Q12772 1141 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 PGM5Q15124 567 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 Q3C1V9 767 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 HS1BP3Q53T59 392 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TIGD1Q96MW7 591 aa15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 TTC12Q9H892 705 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-210ENST00000492909 IGLV3-22A0A075B6J6 115 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 CTAGE5O15320 804 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 EIF2AK2P19525 551 aaKnown RBP15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 INHBEP58166 350 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 CCNA1P78396 465 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 GPRC5AQ8NFJ5 357 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 IL31RAQ8NI17 732 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 ETNPPLQ8TBG4 499 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 NSUN6Q8TEA1 469 aaKnown RBP15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 FAM20AQ96MK3 541 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 PDCD2LQ9BRP1 358 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 MROH8Q9H579 483 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 TSKSQ9UJT2 592 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 PCDHA12Q9UN75 941 aa15.89■□□□□ 0.13
PDZRN3-210ENST00000492909 POLR2DO15514 142 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 TRPA1O75762 1119 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 UBA7P41226 1012 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 SETQ01105 290 aaPredicted RBP15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 PDIA5Q14554 519 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 XRRA1Q6P2D8 792 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 PLA2G4DQ86XP0 818 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 ANKRD13CQ8N6S4 541 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 PDILTQ8N807 584 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 SHCBP1Q8NEM2 672 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 PURBQ96QR8 312 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 MXRA8Q9BRK3 442 aa15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 PYM1Q9BRP8 204 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-210ENST00000492909 MEIS1O00470 390 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 MSH4O15457 936 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 CDC25AP30304 524 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms