RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 MYH1P12882 1939 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 ATG2AQ2TAZ0 1938 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 MICAL3Q7RTP6 2002 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 STK25O00506 426 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 ATP2A1O14983 1001 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 PER2O15055 1255 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 KPNA6O60684 536 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 KINO60870 393 aaKnown RBP6.51□□□□□ -1.37
SEC13-219ENST00000492602 EEF2P13639 858 aaKnown RBP6.51□□□□□ -1.37
SEC13-219ENST00000492602 AKR1B1P15121 316 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 DNAJB1P25685 340 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 EXOSC9Q06265 439 aaKnown RBP6.51□□□□□ -1.37
SEC13-219ENST00000492602 RBL2Q08999 1139 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 ZNF618Q5T7W0 954 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 LRSAM1Q6UWE0 723 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 PRPF38AQ8NAV1 312 aaKnown RBP6.51□□□□□ -1.37
SEC13-219ENST00000492602 KIFC2Q96AC6 838 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 NEK1Q96PY6 1258 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 NUP88Q99567 741 aaPredicted RBP6.51□□□□□ -1.37
SEC13-219ENST00000492602 TLE6Q9H808 572 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 VTA1Q9NP79 307 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 NLRC5Q86WI3 1866 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 SCN10AQ9Y5Y9 1956 aa6.51□□□□□ -1.37
SEC13-219ENST00000492602 RAD50Q92878 1312 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 FANCIQ9NVI1 1328 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 SPEGQ15772 3267 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
SEC13-219ENST00000492602 UQCRFS1P1P0C7P4 283 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 SP9P0CG40 484 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 TRAF7Q6Q0C0 670 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 MICAL1Q8TDZ2 1067 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 POF1BQ8WVV4 589 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 SECISBP2LQ93073 1101 aaKnown RBP6.5□□□□□ -1.37
SEC13-219ENST00000492602 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 ACAD9Q9H845 621 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 A1CFQ9NQ94 594 aaKnown RBP6.5□□□□□ -1.37
SEC13-219ENST00000492602 FBXL21Q9UKT6 434 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 LHX6Q9UPM6 363 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
SEC13-219ENST00000492602 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
SEC13-219ENST00000492602 EMSYQ7Z589 1322 aa6.5□□□□□ -1.37
SEC13-219ENST00000492602 MYO10Q9HD67 2058 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 A6NJR5 290 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 CYSRT1A8MQ03 144 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 RSPH10B2B2RC85 870 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
SEC13-219ENST00000492602 ITGB1P05556 798 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 RSPH10BP0C881 870 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 RFX1P22670 979 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 PMLP29590 882 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 TECP42680 631 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 RING1Q06587 406 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 PTK7Q13308 1070 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 BTG3Q14201 252 aaPredicted RBP6.49□□□□□ -1.37
SEC13-219ENST00000492602 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SPECC1Q5M775 1068 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SESTD1Q86VW0 696 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 WWC1Q8IX03 1113 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SIX5Q8N196 739 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 VN1R2Q8NFZ6 395 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 ATP8B4Q8TF62 1192 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SEPT8Q92599 483 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 COPS5Q92905 334 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 CLP1Q92989 425 aaKnown RBP6.49□□□□□ -1.37
SEC13-219ENST00000492602 WNT8BQ93098 351 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 DYNLL2Q96FJ2 89 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 S1PR5Q9H228 398 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SLC38A10Q9HBR0 1119 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 ERVK-5Q9HDB9 667 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 GPR108Q9NPR9 543 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 COPRSQ9NQ92 184 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 LIMD1Q9UGP4 676 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SWAP70Q9UH65 585 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 CDH22Q9UJ99 828 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
SEC13-219ENST00000492602 ADGRA3Q8IWK6 1321 aa6.49□□□□□ -1.37
SEC13-219ENST00000492602 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 C1QTNF9BB2RNN3 333 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 SLC30A4O14863 429 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PPFIA3O75145 1194 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 IDH1O75874 414 aaKnown RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 C1QTNF9P0C862 333 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 SRGAP2BP0DMP2 458 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 CYP2D6P10635 497 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 THPOP40225 353 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 OAZ1P54368 228 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 SHC2P98077 582 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PDE4BQ07343 736 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PPP2R5BQ15173 497 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 TRIM71Q2Q1W2 868 aaKnown RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 TTC39AQ5SRH9 613 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 ANKRD54Q6NXT1 300 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms