RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 H7C1D1 291 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 PRPF3O43395 683 aaKnown RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 UBOX5O94941 541 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 CHGBP05060 677 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 RPL13P26373 211 aaKnown RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 STAT6P42226 847 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 PAK1Q13153 545 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 ODF2Q5BJF6 829 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 FAM133BQ5BKY9 247 aaKnown RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 RILPL1Q5EBL4 403 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 SUCLG2Q96I99 432 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 PRDM16Q9HAZ2 1276 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 INCENPQ9NQS7 918 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 NOVA2Q9UNW9 492 aaKnown RBP10.65□□□□□ -0.71
VPS8-225ENST00000492449 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 ZSCAN5CA6NGD5 496 aaPredicted RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 ATP6V1G1O75348 118 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 CCNB1P14635 433 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 CALB2P22676 271 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 EEF1GP26641 437 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 NLRP5P59047 1200 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 MAGOHP61326 146 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 CTDSPL2Q05D32 466 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 TNNI3KQ59H18 835 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS8-225ENST00000492449 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 FBF1Q8TES7 1133 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 MAGOHBQ96A72 148 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 PPP1R14BQ96C90 147 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 RPS6KC1Q96S38 1066 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 TIPINQ9BVW5 301 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 RNPEPL1Q9HAU8 725 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 CHPF2Q9P2E5 772 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 TMEM59LQ9UK28 342 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 FPGT-TNNI3KV9GXZ4 949 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 ESYT3A0FGR9 886 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 BACH1O14867 736 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 SART1O43290 800 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 SRGNP10124 158 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 PEX5P50542 639 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 DNM2P50570 870 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 ANTXR2P58335 489 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 NWD1Q149M9 1564 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 SPA17Q15506 151 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 ARHGAP18Q8N392 663 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 RNF10Q8N5U6 811 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 LINS1Q8NG48 757 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 AIFM3Q96NN9 605 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 NDNQ99608 321 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 NSRP1Q9H0G5 558 aaKnown RBP10.64□□□□□ -0.71
VPS8-225ENST00000492449 ABCF3Q9NUQ8 709 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 EHD2Q9NZN4 543 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 DIP2BQ9P265 1576 aa10.64□□□□□ -0.71
VPS8-225ENST00000492449 A8MUI8 341 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 CES2O00748 559 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 UPP2O95045 317 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 MOCS3O95396 460 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 CCDC166P0CW27 439 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 MMP13P45452 471 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 SH3BGRP55822 239 aaPredicted RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 EIF3BP55884 814 aaKnown RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 TRIM29Q14134 588 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 PTPRN2Q92932 1015 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 KLHL29Q96CT2 875 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 IWS1Q96ST2 819 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 PCDHA13Q9Y5I0 950 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 MROH7Q68CQ1 1323 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 NFAT5O94916 1531 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 LAMB4A4D0S4 1761 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 GRM8O00222 908 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 O00370 1275 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 DESP17661 470 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 PCK1P35558 622 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 TMED1Q13445 227 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 RNF220Q5VTB9 566 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 TRIM68Q6AZZ1 485 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 SYCP3Q8IZU3 236 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 RAB3IPQ96QF0 476 aaPredicted RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 VCX3AQ9NNX9 186 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 GALNT8Q9NY28 637 aa10.63□□□□□ -0.71
VPS8-225ENST00000492449 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
VPS8-225ENST00000492449 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 A0A087X0B3 334 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 SNX3O60493 162 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 POLE2P56282 527 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 SAFBQ15424 915 aaKnown RBP eCLIP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms