RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 FDX1P10109 184 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 DNM2P50570 870 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 APLP1P51693 650 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 POLGP54098 1239 aaPredicted RBP5□□□□□ -1.61
TRA2B-215ENST00000492417 GABPAQ06546 454 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 NCBP1Q09161 790 aaKnown RBP5□□□□□ -1.61
TRA2B-215ENST00000492417 MUM1L1Q5H9M0 696 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 SWSAP1Q6NVH7 229 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 POTEDQ86YR6 584 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 NKX2-3Q8TAU0 364 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 TRIM47Q96LD4 638 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 PLCD4Q9BRC7 762 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 MTA3Q9BTC8 594 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 APOL6Q9BWW8 343 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 TRIM6Q9C030 488 aaPredicted RBP5□□□□□ -1.61
TRA2B-215ENST00000492417 CSRNP2Q9H175 543 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 FOXP1Q9H334 677 aaPredicted RBP5□□□□□ -1.61
TRA2B-215ENST00000492417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5□□□□□ -1.617e-7■■■□□ 17.3
TRA2B-215ENST00000492417 SEPT11Q9NVA2 429 aaKnown RBP5□□□□□ -1.61
TRA2B-215ENST00000492417 SERTAD1Q9UHV2 236 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 RABGAP1Q9Y3P9 1069 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 CNTNAP5Q8WYK1 1306 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 TJP1Q07157 1748 aa5□□□□□ -1.61
TRA2B-215ENST00000492417 SFI1A8K8P3 1242 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 PP2D1A8MPX8 630 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 KIF28PB7ZC32 967 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 IPO5O00410 1097 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FOXP2O15409 715 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TBC1D12O60347 775 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ICAM1P05362 532 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ADORA2AP29274 412 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FKBP1BP68106 108 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CUL4AQ13619 759 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FILIP1LQ4L180 1135 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TATDN1Q6P1N9 297 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CATSPERGQ6ZRH7 1159 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 GPBP1Q86WP2 473 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SYMPKQ92797 1274 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 IFT74Q96LB3 600 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TSG101Q99816 390 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 DDX19AQ9NUU7 478 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 PRKAG2Q9UGJ0 569 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 PCDHA7Q9UN72 937 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TACC3Q9Y6A5 838 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 C4AP0C0L4 1744 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 PITPNM2Q9BZ72 1349 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ASB14A6NK59 587 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CYTH3O43739 400 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 KIAA0754O94854 1291 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CTDNEP1O95476 244 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TFRCP02786 760 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FDPSP14324 419 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 MTIF2P46199 727 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SLC9C1Q4G0N8 1177 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 OTUD6AQ7L8S5 288 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SLFN12Q8IYM2 578 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 GPATCH11Q8N954 259 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 OR6J1Q8NGC5 347 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CD99L2Q8TCZ2 262 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 BRI3BPQ8WY22 251 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 L3MBTL3Q96JM7 780 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CDHR1Q96JP9 859 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 RNF208Q9H0X6 261 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 NRBP2Q9NSY0 501 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 DACH1Q9UI36 760 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 KCNH4Q9UQ05 1017 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 WDR19Q8NEZ3 1342 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SPDYE16A6NNV3 312 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 hCG_1984214I3L0E3 225 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 INO80B-WBP1J3KQ70 363 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 STXBP3O00186 592 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 DKC1O60832 514 aaKnown RBP eCLIP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CUTAO60888 179 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 COBLO75128 1261 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ZNF202O95125 648 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SRGAP2CP0DJJ0 459 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ELNP15502 786 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 RGS2P41220 211 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CEP55Q53EZ4 464 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 SPOUT1Q5T280 376 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ZFYVE27Q5T4F4 411 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CCDC183Q5T5S1 534 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FAM160B1Q5W0V3 765 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CEP135Q66GS9 1140 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 EP400NLQ6ZTU2 488 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 STXBP4Q6ZWJ1 553 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 DPH6Q7L8W6 267 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 FILIP1Q7Z7B0 1213 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ZNF713Q8N859 430 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 IPO4Q8TEX9 1081 aaKnown RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 CPLX3Q8WVH0 158 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 GMCL1Q96IK5 515 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 TIGD1Q96MW7 591 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 INO80BQ9C086 356 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-215ENST00000492417 PORCNQ9H237 461 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 RIC8AQ9NPQ8 531 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 GABBR1Q9UBS5 961 aa4.99□□□□□ -1.61
TRA2B-215ENST00000492417 ZC3H4Q9UPT8 1303 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms