RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GLIS3Q8NEA6 775 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 TRIM58Q8NG06 486 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 GOLGA5Q8TBA6 731 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 SNX29Q8TEQ0 813 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 DDX12PQ92771 950 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 NGLY1Q96IV0 654 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 SNX12Q9UMY4 172 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 JRKLQ9Y4A0 524 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 DAGLAQ9Y4D2 1042 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 FGFR1OPO95684 399 aaKnown RBP17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 AKR1B1P15121 316 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 ECM1Q16610 540 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 MAP9Q49MG5 647 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 CREG2Q8IUH2 290 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 CLEC10AQ8IUN9 316 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 TBC1D22AQ8WUA7 517 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 BAP1Q92560 729 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 MLXIPQ9HAP2 919 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 HPCAL4Q9UM19 191 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 THSD7AQ9UPZ6 1657 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 LRRC53A6NM62 1247 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 USO1O60763 962 aaKnown RBP17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 PPP1R11O60927 126 aaPredicted RBP17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 ZMYND10O75800 440 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 ACTN2P35609 894 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 PSMD2Q13200 908 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 KRT79Q5XKE5 535 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 GPCPD1Q9NPB8 672 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 RIC8AQ9NPQ8 531 aa17.9■□□□□ 0.46
SEMA4D-220ENST00000492386 ARFGEF1Q9Y6D6 1849 aa17.89■□□□□ 0.46
SEMA4D-220ENST00000492386 PHACTR2O75167 634 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 SYF2O95926 243 aaKnown RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 MYBL2P10244 700 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 TNNI2P48788 182 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 C2orf54Q08AI8 447 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 LRRC41Q15345 812 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 PPP4R3AQ6IN85 833 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 FOXR2Q6PJQ5 311 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 JMJD4Q9H9V9 463 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 LTBP1Q14766 1721 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 TACC1O75410 805 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 HOXA7P31268 230 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 CLK2P49760 499 aaKnown RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 UBE2SQ16763 222 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 PPP1R18Q6NYC8 613 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 DPP8Q6V1X1 898 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 CCNI2Q6ZMN8 369 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 RRAGAQ7L523 313 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 ZNF572Q7Z3I7 529 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 COG1Q8WTW3 980 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 HAS1Q92839 578 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
SEMA4D-220ENST00000492386 PNMA6FA0A0J9YX94 578 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 MOCS3O95396 460 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 PRLRP16471 622 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 TNNT3P45378 269 aaPredicted RBP17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 PICALMQ13492 652 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ZCWPW2Q504Y3 356 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 LRRC27Q9C0I9 530 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 AKR1B10O60218 316 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 CAPN2P17655 700 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ATP2B2Q01814 1243 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 RAD51AP2Q09MP3 1159 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ASTE1Q2TB18 679 aaPredicted RBP17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 PDXDC1Q6P996 788 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ADGRF4Q8IZF3 695 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 MMGT1Q8N4V1 131 aa17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
SEMA4D-220ENST00000492386 ERCC3P19447 782 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 ITIH3Q06033 890 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 KCNMA1Q12791 1236 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 COASYQ13057 564 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 GPIHBP1Q8IV16 184 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 GSPT2Q8IYD1 628 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 PROM2Q8N271 834 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 CCDC155Q8N6L0 562 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 DEF6Q9H4E7 631 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 PJA2O43164 708 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 RNF40O75150 1001 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 PRPF6O94906 941 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 MYOCDQ8IZQ8 938 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 GJA10Q969M2 543 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 TSG101Q99816 390 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 EDEM3Q9BZQ6 932 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 FAM204AQ9H8W3 233 aa17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 DDX4Q9NQI0 724 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-220ENST00000492386 BBOX1O75936 387 aa17.86■□□□□ 0.45
SEMA4D-220ENST00000492386 TTLL1O95922 423 aa17.86■□□□□ 0.45
SEMA4D-220ENST00000492386 IRX5P78411 483 aaPredicted RBP17.86■□□□□ 0.45
SEMA4D-220ENST00000492386 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms