RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 RAD9AQ99638 391 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 PLXNA3P51805 1871 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 A6NJR5 290 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 NUBP1P53384 320 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 ERVK-21P61565 698 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 PDE4DQ08499 809 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 PTGISQ16647 500 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 ECHDC1Q9NTX5 307 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
CLCNKA-206ENST00000491433 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 KDM4AO75164 1064 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 ARHGEF15O94989 841 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 GJB5O95377 273 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 SELPP16109 830 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 PTGS1P23219 599 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 PTPROQ16827 1216 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 NAPBQ9H115 298 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 GPR179Q6PRD1 2367 aa13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-206ENST00000491433 H3BQ06 376 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 TXNP10599 105 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 RBL2Q08999 1139 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 IKBKEQ14164 716 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 LRRC8DQ7L1W4 858 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 SAMD11Q96NU1 681 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 MAF1Q9H063 256 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
CLCNKA-206ENST00000491433 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 CXCL10P02778 98 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 AVPR2P30518 371 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 PPARAQ07869 468 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 TIGD5Q53EQ6 642 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 INSL6Q9Y581 213 aa13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-206ENST00000491433 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 EDNRBP24530 442 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 CALML3P27482 149 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 SNAP25P60880 206 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 MTUS1Q9ULD2 1270 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
CLCNKA-206ENST00000491433 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 NFIBO00712 420 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 NCK2O43639 380 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 GH1P01241 217 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 CHMP4BP1P59074 171 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 DEFB103AP81534 67 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 RALYQ9UKM9 306 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
CLCNKA-206ENST00000491433 ZNF292O60281 2723 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 M0R2C6 588 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 AMHP03971 560 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 MMP3P08254 477 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 CKBP12277 381 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 PTK7Q13308 1070 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 DGKDQ16760 1214 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 GDF6Q6KF10 455 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 SPRED2Q7Z698 418 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms