RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 KCNH1O95259 989 aa7.33□□□□□ -1.24
SCN1A-206ENST00000491429 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-206ENST00000491429 TACR2P21452 398 aa7.33□□□□□ -1.24
SCN1A-206ENST00000491429 SOX9P48436 509 aa7.33□□□□□ -1.24
SCN1A-206ENST00000491429 PAK2Q13177 524 aa7.33□□□□□ -1.24
SCN1A-206ENST00000491429 ZC3H18Q86VM9 953 aaKnown RBP7.33□□□□□ -1.24
SCN1A-206ENST00000491429 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-206ENST00000491429 METTL5Q9NRN9 209 aaKnown RBP7.33□□□□□ -1.24
SCN1A-206ENST00000491429 PPP4R1LQ9P1A2 415 aa7.33□□□□□ -1.24
SCN1A-206ENST00000491429 SLPIP03973 132 aa7.32□□□□□ -1.24
SCN1A-206ENST00000491429 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
SCN1A-206ENST00000491429 ICAM4Q14773 271 aa7.32□□□□□ -1.24
SCN1A-206ENST00000491429 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
SCN1A-206ENST00000491429 SEC14L1Q92503 715 aa7.32□□□□□ -1.24
SCN1A-206ENST00000491429 KISS1RQ969F8 398 aaPredicted RBP7.32□□□□□ -1.24
SCN1A-206ENST00000491429 EMC9Q9Y3B6 208 aa7.32□□□□□ -1.24
SCN1A-206ENST00000491429 LAMTOR5O43504 91 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 FPR2P25090 351 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 ADAM9Q13443 819 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 PPP2R5EQ16537 467 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 CR1LQ2VPA4 569 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 KIAA1211LQ6NV74 962 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 MILR1Q7Z6M3 343 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 TSC22D4Q9Y3Q8 395 aa7.31□□□□□ -1.24
SCN1A-206ENST00000491429 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 ZNF28P17035 718 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 GDF5P43026 501 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 SLC6A11P48066 632 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 HMGA2P52926 109 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 CRIP3Q6Q6R5 217 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 ZFPM1Q8IX07 1006 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 LGR4Q9BXB1 951 aa7.3□□□□□ -1.24
SCN1A-206ENST00000491429 CYP4F3Q08477 520 aa7.29□□□□□ -1.24
SCN1A-206ENST00000491429 OR6P1Q8NGX9 317 aa7.29□□□□□ -1.24
SCN1A-206ENST00000491429 ZSWIM3Q96MP5 696 aa7.29□□□□□ -1.24
SCN1A-206ENST00000491429 CD248Q9HCU0 757 aa7.29□□□□□ -1.24
SCN1A-206ENST00000491429 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 OVOL3O00110 214 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 GPR42O15529 346 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 ACVRL1P37023 503 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 GTF2IRD2BQ6EKJ0 949 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 VHLLQ6RSH7 139 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 GTF2IRD2Q86UP8 949 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 BVESQ8NE79 360 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 FRS2Q8WU20 508 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 MBD6Q96DN6 1003 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 MRIQ9BWK5 157 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 KLC2Q9H0B6 622 aa7.28□□□□□ -1.24
SCN1A-206ENST00000491429 CYP1A1P04798 512 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-206ENST00000491429 RBM10P98175 930 aaKnown RBP7.27□□□□□ -1.25
SCN1A-206ENST00000491429 SURF1Q15526 300 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 NLRP10Q86W26 655 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 RIOX2Q8IUF8 465 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 ZNF654Q8IZM8 581 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 SHDQ96IW2 340 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 ZNF747Q9BV97 191 aa7.27□□□□□ -1.25
SCN1A-206ENST00000491429 NPEPPSL1A6NEC2 478 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 IL13P35225 146 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 NKX3-2P78367 333 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 MROH9Q5TGP6 573 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 ZNF585AQ6P3V2 769 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 CEP68Q76N32 757 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 PLEKHH3Q7Z736 793 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 CCDC103Q8IW40 242 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 IGDCC4Q8TDY8 1250 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 YTHDC1Q96MU7 727 aaKnown RBP7.26□□□□□ -1.25
SCN1A-206ENST00000491429 YIPF4Q9BSR8 244 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 CYP26B1Q9NR63 512 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 TMEFF2Q9UIK5 374 aaPredicted RBP7.26□□□□□ -1.25
SCN1A-206ENST00000491429 TIMM13Q9Y5L4 95 aaPredicted RBP7.26□□□□□ -1.25
SCN1A-206ENST00000491429 X6R8D5 127 aa7.26□□□□□ -1.25
SCN1A-206ENST00000491429 ARNTLO00327 626 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 MLLT6P55198 1093 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-206ENST00000491429 RPL11P62913 178 aaKnown RBP7.25□□□□□ -1.25
SCN1A-206ENST00000491429 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 CIR1Q86X95 450 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-206ENST00000491429 TRIM59Q8IWR1 403 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 PALM2Q8IXS6 379 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 Q8N1Y9 231 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 CRACR2BQ8N4Y2 399 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-206ENST00000491429 DNERQ8NFT8 737 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 GPRASP2Q96D09 838 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 APBA2Q99767 749 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 PTPN18Q99952 460 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 VPS11Q9H270 941 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 NKX2-4Q9H2Z4 354 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 L2HGDHQ9H9P8 463 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 FBXL7Q9UJT9 491 aa7.25□□□□□ -1.25
SCN1A-206ENST00000491429 CYR61O00622 381 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 BCL6P41182 706 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 CASP7P55210 303 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 PKN3Q6P5Z2 889 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 FAM169BQ8N8A8 192 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 RASGRP4Q8TDF6 673 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 PPP1R14AQ96A00 147 aa7.24□□□□□ -1.25
SCN1A-206ENST00000491429 TRMT2BQ96GJ1 504 aaKnown RBP7.24□□□□□ -1.25
SCN1A-206ENST00000491429 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms