RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 CLK2P49760 499 aaKnown RBP22.4■■□□□ 1.18
SEC22A-209ENST00000491366 AP3B2Q13367 1082 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 TMEM63BQ5T3F8 832 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 TEX2Q8IWB9 1127 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 WDR11Q9BZH6 1224 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 RTEL1Q9NZ71 1219 aa22.4■■□□□ 1.18
SEC22A-209ENST00000491366 PGK1P00558 417 aa22.39■■□□□ 1.17
SEC22A-209ENST00000491366 GJC2Q5T442 439 aaPredicted RBP22.39■■□□□ 1.17
SEC22A-209ENST00000491366 PCNX4Q63HM2 1172 aa22.39■■□□□ 1.17
SEC22A-209ENST00000491366 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
SEC22A-209ENST00000491366 PCDHA4Q9UN74 947 aa22.39■■□□□ 1.17
SEC22A-209ENST00000491366 SYNRGQ9UMZ2 1314 aa22.38■■□□□ 1.17
SEC22A-209ENST00000491366 RBM47A0AV96 593 aaKnown RBP22.38■■□□□ 1.17
SEC22A-209ENST00000491366 DUSP11O75319 330 aaKnown RBP22.38■■□□□ 1.17
SEC22A-209ENST00000491366 MRPS9P82933 396 aaKnown RBP22.38■■□□□ 1.17
SEC22A-209ENST00000491366 TTLL4Q14679 1199 aa22.38■■□□□ 1.17
SEC22A-209ENST00000491366 BLIDQ8IZY5 108 aa22.38■■□□□ 1.17
SEC22A-209ENST00000491366 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
SEC22A-209ENST00000491366 KIAA0100Q14667 2235 aaKnown RBP22.37■■□□□ 1.17
SEC22A-209ENST00000491366 FARP2O94887 1054 aaPredicted RBP22.37■■□□□ 1.17
SEC22A-209ENST00000491366 ARIH2O95376 493 aa22.37■■□□□ 1.17
SEC22A-209ENST00000491366 TXNP10599 105 aaKnown RBP22.37■■□□□ 1.17
SEC22A-209ENST00000491366 HMGN5P82970 282 aaKnown RBP22.37■■□□□ 1.17
SEC22A-209ENST00000491366 FAM177A1Q8N128 213 aaPredicted RBP22.37■■□□□ 1.17
SEC22A-209ENST00000491366 FAM184AQ8NB25 1140 aa22.37■■□□□ 1.17
SEC22A-209ENST00000491366 ARRDC4Q8NCT1 418 aa22.37■■□□□ 1.17
SEC22A-209ENST00000491366 PHF20Q9BVI0 1012 aa22.37■■□□□ 1.17
SEC22A-209ENST00000491366 MRVI1Q9Y6F6 885 aa22.37■■□□□ 1.17
SEC22A-209ENST00000491366 RGS20O76081 388 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 IRX5P78411 483 aaPredicted RBP22.36■■□□□ 1.17
SEC22A-209ENST00000491366 TRIM29Q14134 588 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 DUSP28Q4G0W2 176 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 MCTP2Q6DN12 878 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 GALNT17Q6IS24 598 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 XRRA1Q6P2D8 792 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 TLK2Q86UE8 772 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 DAGLBQ8NCG7 672 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 DIS3LQ8TF46 1054 aaKnown RBP22.36■■□□□ 1.17
SEC22A-209ENST00000491366 COPS5Q92905 334 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 AP5M1Q9H0R1 490 aa22.36■■□□□ 1.17
SEC22A-209ENST00000491366 GNEQ9Y223 722 aaKnown RBP22.36■■□□□ 1.17
SEC22A-209ENST00000491366 MYADML2A6NDP7 307 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 DYNC1LI2O43237 492 aaPredicted RBP22.35■■□□□ 1.17
SEC22A-209ENST00000491366 STAM2O75886 525 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 C6orf222P0C671 652 aaPredicted RBP22.35■■□□□ 1.17
SEC22A-209ENST00000491366 SREBF1P36956 1147 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 LRRC41Q15345 812 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 NPY5RQ15761 445 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 LY6KQ17RY6 165 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 GNPTABQ3T906 1256 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 RNF180Q86T96 592 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 ANKLE1Q8NAG6 615 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 SPC25Q9HBM1 224 aa22.35■■□□□ 1.17
SEC22A-209ENST00000491366 BRCA2P51587 3418 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 KBTBD13C9JR72 458 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 ADAMTS4O75173 837 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 CAPN2P17655 700 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 ARHGAP4P98171 946 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 GUCY1B3Q02153 619 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 KRT40Q6A162 431 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 OR6J1Q8NGC5 347 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 PAWRQ96IZ0 340 aaKnown RBP22.34■■□□□ 1.17
SEC22A-209ENST00000491366 C8orf76Q96K31 380 aa22.34■■□□□ 1.17
SEC22A-209ENST00000491366 INPP4AQ96PE3 977 aaPredicted RBP22.34■■□□□ 1.17
SEC22A-209ENST00000491366 DNM1LO00429 736 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 SORBS3O60504 671 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 ZNF76P36508 570 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 MNX1P50219 401 aaPredicted RBP22.33■■□□□ 1.17
SEC22A-209ENST00000491366 GJA9P57773 515 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 BEX3Q00994 111 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 CCDC62Q6P9F0 684 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 NLRX1Q86UT6 975 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 UPF3AQ9H1J1 476 aaKnown RBP22.33■■□□□ 1.17
SEC22A-209ENST00000491366 BRMS1Q9HCU9 246 aa22.33■■□□□ 1.17
SEC22A-209ENST00000491366 DDX41Q9UJV9 622 aaKnown RBP22.33■■□□□ 1.17
SEC22A-209ENST00000491366 NKRFO15226 690 aaKnown RBP eCLIP22.32■■□□□ 1.16
SEC22A-209ENST00000491366 ITGB5P18084 799 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 KRT2P35908 639 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 IFFO2Q5TF58 517 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 KCNV1Q6PIU1 500 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 PKD2L1Q9P0L9 805 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 UBIAD1Q9Y5Z9 338 aa22.32■■□□□ 1.16
SEC22A-209ENST00000491366 KIAA1217Q5T5P2 1943 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 SPATA31C2B4DYI2 1134 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 K7ELQ4 463 aaPredicted RBP22.31■■□□□ 1.16
SEC22A-209ENST00000491366 M0R2N6 131 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 FIBPO43427 364 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 GH1P01241 217 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 MMP1P03956 469 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 GJB2P29033 226 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 FSCN1Q16658 493 aaKnown RBP22.31■■□□□ 1.16
SEC22A-209ENST00000491366 GNASQ5JWF2 1037 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 KRT25Q7Z3Z0 450 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 NECAB2Q7Z6G3 386 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 CYP2W1Q8TAV3 490 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 MXRA8Q9BRK3 442 aa22.31■■□□□ 1.16
SEC22A-209ENST00000491366 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms