RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 FKBPLQ9UIM3 349 aa8.79□□□□□ -1
CLDN1-202ENST00000490800 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
CLDN1-202ENST00000490800 PFKFB2O60825 505 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 BMP3P12645 472 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 COPB2P35606 906 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 ADCYAP1R1P41586 468 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 LRRC41Q15345 812 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 TMEM67Q5HYA8 995 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 ESR2Q92731 530 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 FERMT2Q96AC1 680 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 DDX11Q96FC9 970 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 ZNF274Q96GC6 653 aaPredicted RBP8.78□□□□□ -1
CLDN1-202ENST00000490800 TMEM87BQ96K49 555 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 MTA3Q9BTC8 594 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 TEX13BQ9BXU2 312 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 UBE2OQ9C0C9 1292 aaKnown RBP8.78□□□□□ -1
CLDN1-202ENST00000490800 LY9Q9HBG7 655 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 SENP2Q9HC62 589 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 RAVER2Q9HCJ3 691 aaKnown RBP8.78□□□□□ -1
CLDN1-202ENST00000490800 TOMM22Q9NS69 142 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 CHMP5Q9NZZ3 219 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 FEM1BQ9UK73 627 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 BRPF3Q9ULD4 1205 aa8.78□□□□□ -1
CLDN1-202ENST00000490800 CTDP1Q9Y5B0 961 aaPredicted RBP8.78□□□□□ -1
CLDN1-202ENST00000490800 TMEM232C9JQI7 657 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 KBTBD13C9JR72 458 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 IFIT3O14879 490 aaKnown RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ATP2A1O14983 1001 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 RANBP6O60518 1105 aaKnown RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 PGK1P00558 417 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ZNF865P0CJ78 1059 aaPredicted RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 PDIA3P30101 505 aaKnown RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 LIFRP42702 1097 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 RTP1P59025 263 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 STK3Q13188 491 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 TDHQ8IZJ6 230 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 GMCL1P1Q8NEA9 526 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 GTF3C6Q969F1 213 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 IL17RBQ9NRM6 502 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 NRBP1Q9UHY1 535 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ISY1Q9ULR0 285 aaKnown RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 SYNPO2Q9UMS6 1093 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 STX8Q9UNK0 236 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ATP11BQ9Y2G3 1177 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.77□□□□□ -1.01
CLDN1-202ENST00000490800 ALPK3Q96L96 1907 aa8.77□□□□□ -1.01
CLDN1-202ENST00000490800 DNAJC25-GNG10A0A024R161 153 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 KLF18A0A0U1RQI7 1052 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 TSPY2A6NKD2 308 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 NMT2O60551 498 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 SNAI1O95863 264 aaPredicted RBP8.76□□□□□ -1.01
CLDN1-202ENST00000490800 S1PR4O95977 384 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 RARBP10826 455 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 NT5C2P49902 561 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 SCRN1Q12765 414 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 SEC23AQ15436 765 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 SGMS1Q86VZ5 419 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 ANKRD35Q8N283 1001 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 CHURC1Q8WUH1 139 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 ZSCAN10Q96SZ4 725 aaPredicted RBP8.76□□□□□ -1.01
CLDN1-202ENST00000490800 LBHD1Q9BQE6 289 aaPredicted RBP8.76□□□□□ -1.01
CLDN1-202ENST00000490800 ZKSCAN3Q9BRR0 538 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 XPNPEP3Q9NQH7 507 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 CNPY2Q9Y2B0 182 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 A0A0G2JMZ2 1700 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 DNAH12Q6ZR08 3092 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 MYH8P13535 1937 aa8.76□□□□□ -1.01
CLDN1-202ENST00000490800 LAMA3Q16787 3333 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 GOLGA8BA8MQT2 603 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 DTNBO60941 627 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 CTDNEP1O95476 244 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 AKR1A1P14550 325 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 SLC1A4P43007 532 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 STAT2P52630 851 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 OAZ1P54368 228 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 SNAP25P60880 206 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 CCT2P78371 535 aaKnown RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 IKQ13123 557 aaPredicted RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 WTAPQ15007 396 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 SART3Q15020 963 aaKnown RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 LRIT3Q3SXY7 679 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 TRIM60Q495X7 471 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 RCSD1Q6JBY9 416 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 APOA5Q6Q788 366 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 MAMDC4Q6UXC1 1216 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 KCTD1Q719H9 257 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 RNF180Q86T96 592 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 RAB11FIP4Q86YS3 637 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 MSL3Q8N5Y2 521 aaKnown RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 ENAHQ8N8S7 591 aaPredicted RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 CHST13Q8NET6 341 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 ADAMTS19Q8TE59 1207 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 GMCL1Q96IK5 515 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms