RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TNFRSF25Q93038 417 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 CDHR1Q96JP9 859 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 FRMPD4Q14CM0 1322 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 PLXNA1Q9UIW2 1896 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 DNAJC25-GNG10A0A024R161 153 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 LAD1O00515 517 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 NEMFO60524 1076 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 NR3C2P08235 984 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 CYP3A4P08684 503 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 UBXN2AP68543 259 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 CNTN2Q02246 1040 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 STK38Q15208 465 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 ZNF792Q3KQV3 632 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 MORN1Q5T089 497 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 RAET1EQ8TD07 263 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 TRIM47Q96LD4 638 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 PDCD2LQ9BRP1 358 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 COL20A1Q9P218 1284 aa12.43□□□□□ -0.42
VARS2-210ENST00000490699 DDX25Q9UHL0 483 aaKnown RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
VARS2-210ENST00000490699 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
VARS2-210ENST00000490699 HOXC6P09630 235 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
VARS2-210ENST00000490699 CYP2B6P20813 491 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 MCM7P33993 719 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 TMEM266Q2M3C6 531 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 PPP4R3AQ6IN85 833 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 KCNV1Q6PIU1 500 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 NIPA1Q7RTP0 329 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 MYH15Q9Y2K3 1946 aa12.42□□□□□ -0.42
VARS2-210ENST00000490699 SYNGAP1Q96PV0 1343 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 SOWAHBA6NEL2 793 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 MAFGO15525 162 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 FLT3LGP49771 235 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 MTMR1Q13613 665 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 CALCRLQ16602 461 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 PRR16Q569H4 304 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 ANO1Q5XXA6 986 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 OLFML2BQ68BL8 750 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 PLA2G4DQ86XP0 818 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 SLFN12Q8IYM2 578 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
VARS2-210ENST00000490699 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 MXRA8Q9BRK3 442 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 VTA1Q9NP79 307 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 POLR3EQ9NVU0 708 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 TRIM17Q9Y577 477 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 MYH7BA7E2Y1 1941 aa12.41□□□□□ -0.42
VARS2-210ENST00000490699 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 FIBPO43427 364 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 COBLO75128 1261 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 YEATS4O95619 227 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
VARS2-210ENST00000490699 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
VARS2-210ENST00000490699 CIITAP33076 1130 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 CEBPZQ03701 1054 aaKnown RBP12.4□□□□□ -0.42
VARS2-210ENST00000490699 DNM1Q05193 864 aaKnown RBP12.4□□□□□ -0.42
VARS2-210ENST00000490699 PRKCZQ05513 592 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 IRF5Q13568 498 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 ZNF174Q15697 407 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 TNPO1Q92973 898 aaKnown RBP12.4□□□□□ -0.42
VARS2-210ENST00000490699 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 SPATA32Q96LK8 384 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 ABHD16BQ9H3Z7 469 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 RTEL1Q9NZ71 1219 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
VARS2-210ENST00000490699 CYP3A7-CYP3A51PA0A087WV96 503 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 TBX3O15119 743 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 TDP2O95551 362 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 CYP3A7P24462 503 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 EDNRBP24530 442 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 TTLL4Q14679 1199 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 Q4G0T1 1027 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms