RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 GUCY1B3Q02153 619 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 TTLL4Q14679 1199 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 IQSEC1Q6DN90 963 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 NIPA1Q7RTP0 329 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 NOSTRINQ8IVI9 506 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 GPRASP2Q96D09 838 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 PURBQ96QR8 312 aaKnown RBP22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 TMEM260Q9NX78 707 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 SEPT4O43236 478 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 SYT1P21579 422 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 U2AF2P26368 475 aaKnown RBP eCLIP22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 CACNB2Q08289 660 aaPredicted RBP22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 ORC2Q13416 577 aaPredicted RBP22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 MCTP1Q6DN14 999 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 PIK3AP1Q6ZUJ8 805 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 BRAPQ7Z569 592 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 NEK8Q86SG6 692 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 GIMAP8Q8ND71 665 aaPredicted RBP22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 RASGRP4Q8TDF6 673 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 TBCKQ8TEA7 893 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 INPP4AQ96PE3 977 aaPredicted RBP22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 GJB4Q9NTQ9 266 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 FOXD4L1Q9NU39 408 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 PLXNA1Q9UIW2 1896 aa22.6■■□□□ 1.21
SHROOM3-209ENST00000490690 VPS37CA5D8V6 355 aaPredicted RBP22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 FIBPO43427 364 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 STX6O43752 255 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 CIITAP33076 1130 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 CEP55Q53EZ4 464 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 SH3TC2Q8TF17 1288 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 ZNF333Q96JL9 665 aa22.59■■□□□ 1.21
SHROOM3-209ENST00000490690 RBM47A0AV96 593 aaKnown RBP22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 ICAM3P32942 547 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 NR5A1Q13285 461 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 CRYGNQ8WXF5 182 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 TNFRSF25Q93038 417 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 MXRA8Q9BRK3 442 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 ZSCAN16Q9H4T2 348 aaPredicted RBP22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 SPC25Q9HBM1 224 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 Q9Y3F1 56 aa22.58■■□□□ 1.21
SHROOM3-209ENST00000490690 DTNBO60941 627 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 ZNF865P0CJ78 1059 aaPredicted RBP22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 CNGA1P29973 690 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 MTMR1Q13613 665 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 RILPL1Q5EBL4 403 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 PPP4R3AQ6IN85 833 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 FBXO16Q8IX29 292 aaPredicted RBP22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 OXER1Q8TDS5 423 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 PGBD1Q96JS3 809 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 TMEM106CQ9BVX2 250 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 KATNBL1Q9H079 304 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 JADE2Q9NQC1 790 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 UBIAD1Q9Y5Z9 338 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 MRVI1Q9Y6F6 885 aa22.57■■□□□ 1.2
SHROOM3-209ENST00000490690 CYP3A7-CYP3A51PA0A087WV96 503 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 RARBP10826 455 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 CYP3A7P24462 503 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 MRPS9P82933 396 aaKnown RBP22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 NEDD9Q14511 834 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 INF2Q27J81 1249 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 CCDC144BQ3MJ40 725 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 BRDTQ58F21 947 aaPredicted RBP22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 SEPT14Q6ZU15 432 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 EEPD1Q7L9B9 569 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 IL31RAQ8NI17 732 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 SENP7Q9BQF6 1050 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 TCEAL9Q9UHQ7 104 aa22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 RBM19Q9Y4C8 960 aaKnown RBP22.56■■□□□ 1.2
SHROOM3-209ENST00000490690 TNFAIP2Q03169 654 aa22.55■■□□□ 1.2
SHROOM3-209ENST00000490690 TAPT1Q6NXT6 567 aa22.55■■□□□ 1.2
SHROOM3-209ENST00000490690 WDR11Q9BZH6 1224 aa22.55■■□□□ 1.2
SHROOM3-209ENST00000490690 RNF208Q9H0X6 261 aa22.55■■□□□ 1.2
SHROOM3-209ENST00000490690 DDX20Q9UHI6 824 aaKnown RBP22.55■■□□□ 1.2
SHROOM3-209ENST00000490690 MEIS1O00470 390 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 DUSP11O75319 330 aaKnown RBP22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 CCL5P13501 91 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 LETM2Q2VYF4 491 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 Q4G0T1 1027 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 DUSP28Q4G0W2 176 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 SPRYD3Q8NCJ5 442 aa22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 PAK6Q9NQU5 681 aaPredicted RBP22.54■■□□□ 1.2
SHROOM3-209ENST00000490690 LCTP09848 1927 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 SPATA31C2B4DYI2 1134 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 TXNP10599 105 aaKnown RBP22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 PLA2G4DQ86XP0 818 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 RTEL1Q9NZ71 1219 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 MTMR6Q9Y217 621 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 ATP6V1DQ9Y5K8 247 aa22.53■■□□□ 1.2
SHROOM3-209ENST00000490690 TBX3O15119 743 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 CCNT1O60563 726 aaKnown RBP22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 BMP15O95972 392 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 GH1P01241 217 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 GJB1P08034 283 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 ITGB5P18084 799 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 CCND3P30281 292 aaPredicted RBP22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 NUCB2P80303 420 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 TRIM32Q13049 653 aa22.52■■□□□ 1.2
SHROOM3-209ENST00000490690 PRR16Q569H4 304 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms