RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 RETREG2Q8NC44 543 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
DUBR-204ENST00000490441 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 TTC28Q96AY4 2481 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 CDH23Q9H251 3354 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
DUBR-204ENST00000490441 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
DUBR-204ENST00000490441 ZBTB5O15062 677 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 MMP3P08254 477 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 ACTN1P12814 892 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 CASTP20810 708 aaKnown RBP13.07□□□□□ -0.32
DUBR-204ENST00000490441 CHMLP26374 656 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 RFC2P35250 354 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
DUBR-204ENST00000490441 BFSP2Q13515 415 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 SEC23AQ15436 765 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
DUBR-204ENST00000490441 COL25A1Q9BXS0 654 aaPredicted RBP13.07□□□□□ -0.32
DUBR-204ENST00000490441 SLC28A3Q9HAS3 691 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 MRVI1Q9Y6F6 885 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
DUBR-204ENST00000490441 EIF3JO75822 258 aaKnown RBP13.06□□□□□ -0.32
DUBR-204ENST00000490441 NR3C2P08235 984 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 CYP21A2P08686 494 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
DUBR-204ENST00000490441 ARHGAP1Q07960 439 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 WTAPQ15007 396 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 DGKDQ16760 1214 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 NCOA7Q8NI08 942 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 PPP1R13LQ8WUF5 828 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 PRDM12Q9H4Q4 367 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
DUBR-204ENST00000490441 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
DUBR-204ENST00000490441 BAZ2BQ9UIF8 2168 aaKnown RBP13.05□□□□□ -0.32
DUBR-204ENST00000490441 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
DUBR-204ENST00000490441 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
DUBR-204ENST00000490441 HSD17B4P51659 736 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
DUBR-204ENST00000490441 PTH1RQ03431 593 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 LAMC2Q13753 1193 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 GRM4Q14833 912 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 PTGISQ16647 500 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 CAGE1Q8TC20 777 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 KATNAL1Q9BW62 490 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
DUBR-204ENST00000490441 DDX41Q9UJV9 622 aaKnown RBP13.05□□□□□ -0.32
DUBR-204ENST00000490441 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
DUBR-204ENST00000490441 E7EWF7 191 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 GCOM1H8Y6P7 765 aaPredicted RBP13.04□□□□□ -0.32
DUBR-204ENST00000490441 SGSM2O43147 1006 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 POLR2MP0CAP2 368 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 IGFBP4P22692 258 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 HOXA13P31271 388 aaPredicted RBP13.04□□□□□ -0.32
DUBR-204ENST00000490441 RABGGTBP53611 331 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 GHRHRQ02643 423 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 KCNV1Q6PIU1 500 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
DUBR-204ENST00000490441 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 EMID1Q96A84 441 aaPredicted RBP13.04□□□□□ -0.32
DUBR-204ENST00000490441 PIGSQ96S52 555 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
DUBR-204ENST00000490441 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
DUBR-204ENST00000490441 OPLAHO14841 1288 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 GTPBP6O43824 516 aaPredicted RBP13.03□□□□□ -0.32
DUBR-204ENST00000490441 PPP1R11O60927 126 aaPredicted RBP13.03□□□□□ -0.32
DUBR-204ENST00000490441 CCND2P30279 289 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 PPTC7Q8NI37 304 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 AFAP1L1Q8TED9 768 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
DUBR-204ENST00000490441 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
DUBR-204ENST00000490441 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.32
DUBR-204ENST00000490441 GBF1Q92538 1859 aa13.02□□□□□ -0.32
DUBR-204ENST00000490441 TRIP12Q14669 1992 aaPredicted RBP13.02□□□□□ -0.32
DUBR-204ENST00000490441 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
DUBR-204ENST00000490441 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
DUBR-204ENST00000490441 ZNF286BP0CG31 522 aa13.02□□□□□ -0.33
DUBR-204ENST00000490441 PSEN2P49810 448 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms