RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 A6NJR5 290 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 TIMP1P01033 207 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 CD4P01730 458 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
SMC4-222ENST00000490207 CCND2P30279 289 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 FPGSQ05932 587 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 ARHGAP1Q07960 439 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 C9orf50Q5SZB4 431 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 RBM28Q9NW13 759 aaKnown RBP22.8■■□□□ 1.24
SMC4-222ENST00000490207 FRMPD4Q14CM0 1322 aa22.8■■□□□ 1.24
SMC4-222ENST00000490207 KPNA6O60684 536 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 CCDC82Q8N4S0 544 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 SMARCC2Q8TAQ2 1214 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 CUL5Q93034 780 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 JAKMIP1Q96N16 626 aaKnown RBP22.79■■□□□ 1.24
SMC4-222ENST00000490207 PPP1R12CQ9BZL4 782 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 DDX41Q9UJV9 622 aaKnown RBP22.79■■□□□ 1.24
SMC4-222ENST00000490207 SNX14Q9Y5W7 946 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 CNTNAP5Q8WYK1 1306 aa22.79■■□□□ 1.24
SMC4-222ENST00000490207 ZBTB43O43298 467 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 B4GALT4O60513 344 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 MMP3P08254 477 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 SHHQ15465 462 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 RTN1Q16799 776 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 VSIG10LQ86VR7 867 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 AFG1LQ8WV93 481 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 BRPF3Q9ULD4 1205 aa22.78■■□□□ 1.24
SMC4-222ENST00000490207 KLF18A0A0U1RQI7 1052 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 hCG_1642624A0A1W2PR95 340 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 GOLGA8AA7E2F4 631 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 GOLGA8BA8MQT2 603 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 RGS20O76081 388 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 CPA1P15085 419 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 FGD1P98174 961 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 MFSD5Q6N075 450 aa22.77■■□□□ 1.24
SMC4-222ENST00000490207 ALDH8A1Q9H2A2 487 aaPredicted RBP22.77■■□□□ 1.24
SMC4-222ENST00000490207 PIK3CDO00329 1044 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 EPHB4P54760 987 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 FAM47CQ5HY64 1035 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 GPR153Q6NV75 609 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 KCNV1Q6PIU1 500 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 USP17L6PQ6QN14 398 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 BLOC1S2Q6QNY1 142 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 EMID1Q96A84 441 aaPredicted RBP22.76■■□□□ 1.23
SMC4-222ENST00000490207 TRPV6Q9H1D0 765 aa22.76■■□□□ 1.23
SMC4-222ENST00000490207 TANC1Q9C0D5 1861 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 DOCK5Q9H7D0 1870 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 RCAN1P53805 252 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 PPIGQ13427 754 aaKnown RBP eCLIP22.75■■□□□ 1.23
SMC4-222ENST00000490207 NBPF20Q3BBV1 942 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 Q6ZUG5 572 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 HEATR3Q7Z4Q2 680 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 GPKOWQ92917 476 aaPredicted RBP eCLIP22.75■■□□□ 1.234e-13■□□□□ 10.3
SMC4-222ENST00000490207 ZFP91Q96JP5 570 aaPredicted RBP22.75■■□□□ 1.23
SMC4-222ENST00000490207 HIPK3Q9H422 1215 aa22.75■■□□□ 1.23
SMC4-222ENST00000490207 NAP1L2Q9ULW6 460 aaPredicted RBP22.75■■□□□ 1.23
SMC4-222ENST00000490207 MEIS2O14770 477 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
SMC4-222ENST00000490207 CYP2C18P33260 490 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 LAMC2Q13753 1193 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 GNPTABQ3T906 1256 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 NFRKBQ6P4R8 1299 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 DHX37Q8IY37 1157 aaKnown RBP22.74■■□□□ 1.23
SMC4-222ENST00000490207 TMEM199Q8N511 208 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 RNPC3Q96LT9 517 aaKnown RBP22.74■■□□□ 1.23
SMC4-222ENST00000490207 PSTPIP2Q9H939 334 aa22.74■■□□□ 1.23
SMC4-222ENST00000490207 TRMT13Q9NUP7 481 aaKnown RBP22.74■■□□□ 1.23
SMC4-222ENST00000490207 STAM2O75886 525 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 CASTP20810 708 aaKnown RBP22.73■■□□□ 1.23
SMC4-222ENST00000490207 UBA1P22314 1058 aaKnown RBP22.73■■□□□ 1.23
SMC4-222ENST00000490207 MRPS9P82933 396 aaKnown RBP22.73■■□□□ 1.23
SMC4-222ENST00000490207 APOBRQ0VD83 1088 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 DGKDQ16760 1214 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 PPTC7Q8NI37 304 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 PPP1R13LQ8WUF5 828 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 NOC4LQ9BVI4 516 aaKnown RBP22.73■■□□□ 1.23
SMC4-222ENST00000490207 UMODL1Q5DID0 1318 aa22.73■■□□□ 1.23
SMC4-222ENST00000490207 SORBS3O60504 671 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 GGPS1O95749 300 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 SUPT20HL2P0C7V6 817 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 RPS6KB1P23443 525 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 PSMA5P28066 241 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 METAP2P50579 478 aaKnown RBP eCLIP22.72■■□□□ 1.23
SMC4-222ENST00000490207 CHMP4BP1P59074 171 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 PTPN11Q06124 597 aaPredicted RBP22.72■■□□□ 1.23
SMC4-222ENST00000490207 FUT2Q10981 343 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 UBE2SQ16763 222 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 WWC2Q6AWC2 1192 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 BRF1Q92994 677 aa22.72■■□□□ 1.23
SMC4-222ENST00000490207 TGFB3P10600 412 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 CSF2RAP15509 400 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 CDC27P30260 824 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
SMC4-222ENST00000490207 MYSM1Q5VVJ2 828 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 PCNX4Q63HM2 1172 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 INPP4AQ96PE3 977 aaPredicted RBP22.71■■□□□ 1.23
SMC4-222ENST00000490207 FAM217BQ9NTX9 383 aaPredicted RBP22.71■■□□□ 1.23
SMC4-222ENST00000490207 NID2Q14112 1375 aa22.71■■□□□ 1.23
SMC4-222ENST00000490207 ZNF286BP0CG31 522 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 CYP2C9P11712 490 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms