RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 C10orf62Q5T681 223 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 ACBD5Q5T8D3 534 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 CPA6Q8N4T0 437 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 CHST14Q8NCH0 376 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 PCDH19Q8TAB3 1148 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 NPLOC4Q8TAT6 608 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 FBXO41Q8TF61 875 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 GPR27Q9NS67 375 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 CHST7Q9NS84 486 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 TMEFF2Q9UIK5 374 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 PNMA8BQ9ULN7 279 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 DAGLAQ9Y4D2 1042 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 NPFFR2Q9Y5X5 522 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 ARNTLO00327 626 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 SIGLEC6O43699 453 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 MSCO60682 206 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 PPFIA4O75335 1185 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 PRAMEF1O95521 474 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 CD3EP07766 207 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 RECQLP46063 649 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 KPNA1P52294 538 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 IL31Q6EBC2 164 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 CDPF1Q6NVV7 123 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 C11orf96Q7Z7L8 435 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 PNMA8AQ86V59 439 aaPredicted RBP8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 CLRN3Q8NCR9 226 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 CLIP3Q96DZ5 547 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 CELF4Q9BZC1 486 aaKnown RBP8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 UBA5Q9GZZ9 404 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 ACSS3Q9H6R3 686 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 LGR6Q9HBX8 967 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 GIT1Q9Y2X7 761 aa8.3□□□□□ -1.08
TM9SF3-206ENST00000490192 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 IFIT2P09913 472 aaKnown RBP8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 NBPF7P0C2Y1 421 aaPredicted RBP8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 PAK1Q13153 545 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 RALBP1Q15311 655 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 TMEM240Q5SV17 173 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 CWF19L1Q69YN2 538 aaKnown RBP8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 PGM2L1Q6PCE3 622 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 LBX2Q6XYB7 198 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 C1orf162Q8NEQ5 155 aaPredicted RBP8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 FAXDC2Q96IV6 333 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 SARGQ9BW04 601 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 C14orf119Q9NWQ9 140 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 PIM2Q9P1W9 311 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
TM9SF3-206ENST00000490192 PTPDC1A2A3K4 754 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 C2orf71A6NGG8 1288 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 PRR19A6NJB7 356 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 AURKAO14965 403 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 LCP1P13796 627 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 CYP2C19P33261 490 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 LTBRP36941 435 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 NEK3P51956 506 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 SESN3P58005 492 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 RGL3Q3MIN7 710 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 EPM2AIP1Q7L775 607 aaPredicted RBP8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 CCDC103Q8IW40 242 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 SLC5A5Q92911 643 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 PSMG3-AS1Q96PY0 264 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 METTL22Q9BUU2 404 aaPredicted RBP8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 H2AFY2Q9P0M6 372 aaPredicted RBP8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 USP25Q9UHP3 1055 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 RCAN3Q9UKA8 241 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 INTUQ9ULD6 942 aa8.28□□□□□ -1.08
TM9SF3-206ENST00000490192 CCDC189A1A4V9 331 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 SH3BP5O60239 455 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 MED26O95402 600 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 GSNP06396 782 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 CYP7A1P22680 504 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 CTSKP43235 329 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 DNM2P50570 870 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 PICALMQ13492 652 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 ODF1Q14990 250 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 TESK1Q15569 626 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 ZRSR2Q15696 482 aaKnown RBP8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 CPSF6Q16630 551 aaKnown RBP eCLIP8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 OVCH1Q7RTY7 1134 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 LRGUKQ96M69 825 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 ANLNQ9NQW6 1124 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 TAGLN3Q9UI15 199 aa8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 TPX2Q9ULW0 747 aaKnown RBP8.27□□□□□ -1.09
TM9SF3-206ENST00000490192 CCDC66A2RUB6 948 aa8.26□□□□□ -1.09
TM9SF3-206ENST00000490192 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
TM9SF3-206ENST00000490192 CFBP00751 764 aa8.26□□□□□ -1.09
TM9SF3-206ENST00000490192 LTFP02788 710 aa8.26□□□□□ -1.09
TM9SF3-206ENST00000490192 SOD2P04179 222 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms