RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	PCDHA4	Q9UN74	947 aa		20.77	■□□□□ 0.92
SRM-206	ENST00000490101		A0A0C4DFX4	3053 aa		20.77	■□□□□ 0.92
SRM-206	ENST00000490101	LTBP2	Q14767	1821 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	ZNF865	P0CJ78	1059 aa	Predicted RBP	20.76	■□□□□ 0.91
SRM-206	ENST00000490101	AKR1A1	P14550	325 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	SNAP25	P60880	206 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	GNL2	Q13823	731 aa	Known RBP	20.76	■□□□□ 0.91
SRM-206	ENST00000490101	ATL3	Q6DD88	541 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	RNF180	Q86T96	592 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	NOSTRIN	Q8IVI9	506 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	BLID	Q8IZY5	108 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	OXER1	Q8TDS5	423 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	C6orf50	Q9HD87	102 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	PCDHA1	Q9Y5I3	950 aa		20.76	■□□□□ 0.91
SRM-206	ENST00000490101	SMCO2	A6NFE2	343 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	GNA11	P29992	359 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	SLC17A8	Q8NDX2	589 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	TNFRSF25	Q93038	417 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	SLC38A10	Q9HBR0	1119 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	ZHX1	Q9UKY1	873 aa	Predicted RBP	20.75	■□□□□ 0.91
SRM-206	ENST00000490101	PNMA2	Q9UL42	364 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	PHF24	Q9UPV7	400 aa		20.75	■□□□□ 0.91
SRM-206	ENST00000490101	NR5A1	Q13285	461 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	SNX17	Q15036	470 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	FAM173B	Q6P4H8	233 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	TEX2	Q8IWB9	1127 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	ANKRD35	Q8N283	1001 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	BICD2	Q8TD16	824 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	GLT8D2	Q9H1C3	349 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	PDLIM7	Q9NR12	457 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101	HOMER2	Q9NSB8	354 aa		20.74	■□□□□ 0.91
SRM-206	ENST00000490101		M0R2N6	131 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	ATP2A1	O14983	1001 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	ADCY7	P51828	1080 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	TLE2	Q04725	743 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	DNM1	Q05193	864 aa	Known RBP	20.73	■□□□□ 0.91
SRM-206	ENST00000490101	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	20.73	■□□□□ 0.91
SRM-206	ENST00000490101	MYSM1	Q5VVJ2	828 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	FOXD4L3	Q6VB84	417 aa	Predicted RBP	20.73	■□□□□ 0.91
SRM-206	ENST00000490101	SH3RF1	Q7Z6J0	888 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	BAD	Q92934	168 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	CHAMP1	Q96JM3	812 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	ZNF396	Q96N95	335 aa	Predicted RBP	20.73	■□□□□ 0.91
SRM-206	ENST00000490101	RIC8A	Q9NPQ8	531 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	SYNGAP1	Q96PV0	1343 aa		20.73	■□□□□ 0.91
SRM-206	ENST00000490101	DNAJC25-GNG10	A0A024R161	153 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101		A0A1W2PQ45	241 aa	Predicted RBP	20.72	■□□□□ 0.91
SRM-206	ENST00000490101		A0A1W2PQY0	241 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	ADAMTS3	O15072	1205 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	SNAI1	O95863	264 aa	Predicted RBP	20.72	■□□□□ 0.91
SRM-206	ENST00000490101	ICAM1	P05362	532 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	MCM4	P33991	863 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	MRPL12	P52815	198 aa	Known RBP	20.72	■□□□□ 0.91
SRM-206	ENST00000490101	CCDC174	Q6PII3	467 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	MTMR10	Q9NXD2	777 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	FAM184B	Q9ULE4	1060 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	ZNF536	O15090	1300 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	SYNRG	Q9UMZ2	1314 aa		20.72	■□□□□ 0.91
SRM-206	ENST00000490101	TRIM43B	A6NCK2	446 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	PQBP1	O60828	265 aa	Known RBP	20.71	■□□□□ 0.91
SRM-206	ENST00000490101	KRT85	P78386	507 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	MSL3	Q8N5Y2	521 aa	Known RBP	20.71	■□□□□ 0.91
SRM-206	ENST00000490101	CUL5	Q93034	780 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	TRIM43	Q96BQ3	446 aa	Predicted RBP	20.71	■□□□□ 0.91
SRM-206	ENST00000490101	PSTPIP2	Q9H939	334 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	FBXO40	Q9UH90	709 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	PCDHA6	Q9UN73	950 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	PCDHA8	Q9Y5H6	950 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	ABCB11	O95342	1321 aa		20.71	■□□□□ 0.91
SRM-206	ENST00000490101	ADAMTS4	O75173	837 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	OAZ1	P54368	228 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	SHH	Q15465	462 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	NFKBIB	Q15653	356 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	USH1G	Q495M9	461 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	C9orf50	Q5SZB4	431 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	C1orf53	Q5VUE5	145 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	MAMDC4	Q6UXC1	1216 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	REXO1	Q8N1G1	1221 aa	Known RBP	20.7	■□□□□ 0.9
SRM-206	ENST00000490101	CHST13	Q8NET6	341 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	20.7	■□□□□ 0.9
SRM-206	ENST00000490101	CFAP45	Q9UL16	551 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	MRPL11	Q9Y3B7	192 aa	Known RBP	20.7	■□□□□ 0.9
SRM-206	ENST00000490101	MYH15	Q9Y2K3	1946 aa		20.7	■□□□□ 0.9
SRM-206	ENST00000490101	GOLGA6L22	H0YM25	854 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	CLTB	P09497	229 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	ACVR2B	Q13705	512 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	RILPL1	Q5EBL4	403 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	MCTP2	Q6DN12	878 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	KRT25	Q7Z3Z0	450 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	ZNF467	Q7Z7K2	595 aa	Predicted RBP	20.69	■□□□□ 0.9
SRM-206	ENST00000490101	FGD4	Q96M96	766 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	AGBL1	Q96MI9	1066 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	FAM161B	Q96MY7	647 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	TFIP11	Q9UBB9	837 aa	Known RBP	20.69	■□□□□ 0.9
SRM-206	ENST00000490101	CCPG1	Q9ULG6	757 aa		20.69	■□□□□ 0.9
SRM-206	ENST00000490101	TCHH	Q07283	1943 aa		20.68	■□□□□ 0.9
SRM-206	ENST00000490101	MCM3AP	O60318	1980 aa		20.68	■□□□□ 0.9
SRM-206	ENST00000490101	OPLAH	O14841	1288 aa		20.68	■□□□□ 0.9
SRM-206	ENST00000490101	NCL	P19338	710 aa	Known RBP	20.68	■□□□□ 0.9
SRM-206	ENST00000490101	CLK2	P49760	499 aa	Known RBP	20.68	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms