RNA–Protein interactions for RNA: ENST00000489848.5

NEPRO-218, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,576 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-218ENST00000489848 POLR3EQ9NVU0 708 aa18.44■□□□□ 0.54
NEPRO-218ENST00000489848 RBM28Q9NW13 759 aaKnown RBP18.44■□□□□ 0.54
NEPRO-218ENST00000489848 SOX1O00570 391 aaPredicted RBP18.43■□□□□ 0.54
NEPRO-218ENST00000489848 MEIS2O14770 477 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 CD4P01730 458 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 ARHGAP1Q07960 439 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 ITGA7Q13683 1181 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 LY6KQ17RY6 165 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 LRIT3Q3SXY7 679 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 BADQ92934 168 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 SEZ6LQ9BYH1 1024 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 TMEM39AQ9NV64 488 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 DDX41Q9UJV9 622 aaKnown RBP18.43■□□□□ 0.54
NEPRO-218ENST00000489848 COL6A3P12111 3177 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 NID2Q14112 1375 aa18.43■□□□□ 0.54
NEPRO-218ENST00000489848 KLF18A0A0U1RQI7 1052 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 PSMC6P62333 389 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 RTN1Q16799 776 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 FCHSD1Q86WN1 690 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 CCDC82Q8N4S0 544 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
NEPRO-218ENST00000489848 FAM217BQ9NTX9 383 aaPredicted RBP18.42■□□□□ 0.54
NEPRO-218ENST00000489848 GH1P01241 217 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
NEPRO-218ENST00000489848 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 Q6ZUG5 572 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 MRVI1Q9Y6F6 885 aa18.42■□□□□ 0.54
NEPRO-218ENST00000489848 GOLGA8AA7E2F4 631 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 GOLGA8BA8MQT2 603 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 MYCLP12524 364 aaPredicted RBP18.41■□□□□ 0.54
NEPRO-218ENST00000489848 RAG1P15918 1043 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 CDC27P30260 824 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 CCND2P30279 289 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 BRF1Q92994 677 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 MTG1Q9BT17 334 aaPredicted RBP18.41■□□□□ 0.54
NEPRO-218ENST00000489848 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
NEPRO-218ENST00000489848 KPNA6O60684 536 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 MMP3P08254 477 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 MYL3P08590 195 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
NEPRO-218ENST00000489848 PSMA5P28066 241 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
NEPRO-218ENST00000489848 APOBRQ0VD83 1088 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 AFG1LQ8WV93 481 aa18.4■□□□□ 0.54
NEPRO-218ENST00000489848 GPKOWQ92917 476 aaPredicted RBP eCLIP18.4■□□□□ 0.54
NEPRO-218ENST00000489848 TLR3O15455 904 aaKnown RBP18.39■□□□□ 0.53
NEPRO-218ENST00000489848 TIMP1P01033 207 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 FGD1P98174 961 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 WWC2Q6AWC2 1192 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 CUL5Q93034 780 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 LRCH3Q96II8 777 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 INPP4AQ96PE3 977 aaPredicted RBP18.39■□□□□ 0.53
NEPRO-218ENST00000489848 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
NEPRO-218ENST00000489848 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
NEPRO-218ENST00000489848 B4GALT4O60513 344 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 STAM2O75886 525 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 TGFB3P10600 412 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 HOXD8P13378 290 aaPredicted RBP18.38■□□□□ 0.53
NEPRO-218ENST00000489848 UBA1P22314 1058 aaKnown RBP18.38■□□□□ 0.53
NEPRO-218ENST00000489848 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
NEPRO-218ENST00000489848 EPHB4P54760 987 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 EVCP57679 992 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 SP2Q02086 613 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 FPGSQ05932 587 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 C9orf50Q5SZB4 431 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 MFSD5Q6N075 450 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 PPP1R18Q6NYC8 613 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 PPTC7Q8NI37 304 aa18.38■□□□□ 0.53
NEPRO-218ENST00000489848 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
NEPRO-218ENST00000489848 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 ICAM3P32942 547 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
NEPRO-218ENST00000489848 SEMA3FQ13275 785 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 LAMC2Q13753 1193 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 SHHQ15465 462 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 GNPTABQ3T906 1256 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 XRRA1Q6P2D8 792 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 NFRKBQ6P4R8 1299 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 KAT2BQ92831 832 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 TM6SF1Q9BZW5 370 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 TRPV6Q9H1D0 765 aa18.37■□□□□ 0.53
NEPRO-218ENST00000489848 CCDC196A0A1B0GTZ2 297 aa18.36■□□□□ 0.53
NEPRO-218ENST00000489848 hCG_1984214I3L0E3 225 aa18.36■□□□□ 0.53
NEPRO-218ENST00000489848 UBE2SQ16763 222 aa18.36■□□□□ 0.53
NEPRO-218ENST00000489848 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
NEPRO-218ENST00000489848 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
NEPRO-218ENST00000489848 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms