RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 PALM3A6NDB9 673 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-207ENST00000489692 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 PRC1O43663 620 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 CSF2RAP15509 400 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 EDNRBP24530 442 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-207ENST00000489692 CYP2C18P33260 490 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 CCL23P55773 120 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 FCHSD1Q86WN1 690 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-207ENST00000489692 IWS1Q96ST2 819 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
GGPS1-207ENST00000489692 RBM47A0AV96 593 aaKnown RBP13.54□□□□□ -0.24
GGPS1-207ENST00000489692 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-207ENST00000489692 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 ACRP10323 421 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 KIF5BP33176 963 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 PKP1Q13835 747 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 LY6KQ17RY6 165 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 SEZ6LQ9BYH1 1024 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 MAF1Q9H063 256 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 MTMR10Q9NXD2 777 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
GGPS1-207ENST00000489692 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 SORBS3O60504 671 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 B4GALT4O60513 344 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 KPNA6O60684 536 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 EIF3JO75822 258 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 ARIH2O95376 493 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 GH1P01241 217 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 NR3C2P08235 984 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 SUPT20HL2P0C7V6 817 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 RPS6KB1P23443 525 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 MCM5P33992 734 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 MB21D2Q8IYB1 491 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 ZNF654Q8IZM8 581 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 AFG1LQ8WV93 481 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 LMBRD1Q9NUN5 540 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
GGPS1-207ENST00000489692 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
GGPS1-207ENST00000489692 ZNFX1Q9P2E3 1918 aaKnown RBP13.52□□□□□ -0.24
GGPS1-207ENST00000489692 LAMA3Q16787 3333 aa13.52□□□□□ -0.24
GGPS1-207ENST00000489692 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-207ENST00000489692 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-207ENST00000489692 CD4P01730 458 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 CYP2C9P11712 490 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 ANTXR2P58335 489 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 TROAPQ12815 778 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 FAM109BQ6ICB4 259 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-207ENST00000489692 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-207ENST00000489692 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 TMTC2Q8N394 836 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 CUL5Q93034 780 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.25
GGPS1-207ENST00000489692 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
GGPS1-207ENST00000489692 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 TCHHQ07283 1943 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 DDAH1O94760 285 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 MBD3O95983 291 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 FGBP02675 491 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 RXRAP19793 462 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 MRE11P49959 708 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 GNAQP50148 359 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 HSD17B4P51659 736 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 SYNE3Q6ZMZ3 975 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 DHX37Q8IY37 1157 aaKnown RBP13.51□□□□□ -0.25
GGPS1-207ENST00000489692 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-207ENST00000489692 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
GGPS1-207ENST00000489692 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 IL23AQ9NPF7 189 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 MAP3K20Q9NYL2 800 aaKnown RBP13.51□□□□□ -0.25
GGPS1-207ENST00000489692 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
GGPS1-207ENST00000489692 SLC12A7Q9Y666 1083 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 913.8 ms