RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 FLRT1Q9NZU1 646 aa12.43□□□□□ -0.42
TFF3-203ENST00000489676 SYNGAP1Q96PV0 1343 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 IGLV3-22A0A075B6J6 115 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 RGS20O76081 388 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 TDP2O95551 362 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 CYP3A7P24462 503 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 RGS19P49795 217 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 USP11P51784 963 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 NBR1Q14596 966 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
TFF3-203ENST00000489676 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 FAM173BQ6P4H8 233 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 ARMCX2Q7L311 632 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
TFF3-203ENST00000489676 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
TFF3-203ENST00000489676 INPP4AQ96PE3 977 aaPredicted RBP12.42□□□□□ -0.42
TFF3-203ENST00000489676 UBIAD1Q9Y5Z9 338 aa12.42□□□□□ -0.42
TFF3-203ENST00000489676 ASB14A6NK59 587 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 FAM86B1E9PN63 330 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
TFF3-203ENST00000489676 FAM86B2P0C5J1 330 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 GCFC2P16383 781 aaKnown RBP12.41□□□□□ -0.42
TFF3-203ENST00000489676 ITGB5P18084 799 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 CYP2B6P20813 491 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 HOXD10P28358 340 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 CCND2P30279 289 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 PRMT2P55345 433 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 TRIB2Q92519 343 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
TFF3-203ENST00000489676 SLC5A4Q9NY91 659 aa12.41□□□□□ -0.42
TFF3-203ENST00000489676 MEIS1O00470 390 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 SLC37A4O43826 429 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 STAM2O75886 525 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 ORC2Q13416 577 aaPredicted RBP12.4□□□□□ -0.42
TFF3-203ENST00000489676 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 LETM2Q2VYF4 491 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 CEP55Q53EZ4 464 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 NIPA1Q7RTP0 329 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 CYP2W1Q8TAV3 490 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
TFF3-203ENST00000489676 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.4□□□□□ -0.42
TFF3-203ENST00000489676 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
TFF3-203ENST00000489676 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
TFF3-203ENST00000489676 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
TFF3-203ENST00000489676 PDE4DQ08499 809 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 STXBP2Q15833 593 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 Q4G0T1 1027 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
TFF3-203ENST00000489676 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 VTA1Q9NP79 307 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 JADE2Q9NQC1 790 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 PTCH2Q9Y6C5 1203 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
TFF3-203ENST00000489676 TCHHQ07283 1943 aa12.39□□□□□ -0.43
TFF3-203ENST00000489676 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 B4DLN1 442 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 CCNT1O60563 726 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 CYBAP13498 195 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 ICAM3P32942 547 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 CYP2C19P33261 490 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 SETQ01105 290 aaPredicted RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 PTPAQ15257 358 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 TAPT1Q6NXT6 567 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 POTEDQ86YR6 584 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 FBXO16Q8IX29 292 aaPredicted RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 TMEM60Q9H2L4 133 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
TFF3-203ENST00000489676 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 DOCK5Q9H7D0 1870 aa12.38□□□□□ -0.43
TFF3-203ENST00000489676 FIBPO43427 364 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ADCY3O60266 1144 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 NEMFO60524 1076 aa12.37□□□□□ -0.43
TFF3-203ENST00000489676 ARIH2O95376 493 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms