RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 IRF5Q13568 498 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 CEP55Q53EZ4 464 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 OLFML2BQ68BL8 750 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 IL31RAQ8NI17 732 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 NPLOC4Q8TAT6 608 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 TSKSQ9UJT2 592 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 CFAP45Q9UL16 551 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
C9orf3-221ENST00000489562 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
C9orf3-221ENST00000489562 MYCLP12524 364 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-221ENST00000489562 ATP2B1P20020 1258 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 CYP2B6P20813 491 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-221ENST00000489562 FLT3LGP49771 235 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 TOB1P50616 345 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-221ENST00000489562 KRT85P78386 507 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 PRKCZQ05513 592 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 Q4G0T1 1027 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 ARMCX2Q7L311 632 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 NLRX1Q86UT6 975 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 CDHR1Q96JP9 859 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 MBOAT7Q96N66 472 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 MXRA8Q9BRK3 442 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.77■□□□□ 0.12
C9orf3-221ENST00000489562 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 UBIAD1Q9Y5Z9 338 aa15.77■□□□□ 0.12
C9orf3-221ENST00000489562 LAD1O00515 517 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 MAFGO15525 162 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 HSPA1AP0DMV8 641 aaKnown RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 HSPA1BP0DMV9 641 aaKnown RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 HSPA8P11142 646 aaKnown RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 MRPS9P82933 396 aaKnown RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 ANO1Q5XXA6 986 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 FAM173BQ6P4H8 233 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 INPP4AQ96PE3 977 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 VTA1Q9NP79 307 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 JADE2Q9NQC1 790 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 RTEL1Q9NZ71 1219 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 DDX25Q9UHL0 483 aaKnown RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 GABRQQ9UN88 632 aa15.76■□□□□ 0.11
C9orf3-221ENST00000489562 MORC2Q9Y6X9 1032 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-221ENST00000489562 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 MEIS1O00470 390 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 TBX3O15119 743 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 FOXN1O15353 648 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 EDIL3O43854 480 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 NEMFO60524 1076 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 TDP2O95551 362 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 YEATS4O95619 227 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 MCM7P33993 719 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 NASPP49321 788 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-221ENST00000489562 CAP1Q01518 475 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 DNM1Q05193 864 aaKnown RBP15.75■□□□□ 0.11
C9orf3-221ENST00000489562 ZNF174Q15697 407 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 KCNV1Q6PIU1 500 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 PXYLP1Q8TE99 480 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
C9orf3-221ENST00000489562 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 SCAND2PQ9GZW5 306 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-221ENST00000489562 ABHD16BQ9H3Z7 469 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-221ENST00000489562 NRBP1Q9UHY1 535 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
C9orf3-221ENST00000489562 IGLV3-22A0A075B6J6 115 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 FIBPO43427 364 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 IGHA2P01877 340 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 ITGB5P18084 799 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 MTMR1Q13613 665 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
C9orf3-221ENST00000489562 PRR16Q569H4 304 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 MFSD14CQ5VZR4 134 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 CLEC17AQ6ZS10 378 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 OTOP1Q7RTM1 612 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 PLA2G4DQ86XP0 818 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 RAET1EQ8TD07 263 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 TRIM17Q9Y577 477 aa15.74■□□□□ 0.11
C9orf3-221ENST00000489562 WNT7AO00755 349 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 SLC37A4O43826 429 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 BAG4O95429 457 aaKnown RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 TGFB3P10600 412 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 ICAM3P32942 547 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 PRPHP41219 470 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 ATP2C1P98194 919 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 NBR1Q14596 966 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 STK38Q15208 465 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 CALCRLQ16602 461 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 FOXD4L6Q3SYB3 417 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 ARL6IP4Q66PJ3 421 aaKnown RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 FOXD4L3Q6VB84 417 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-221ENST00000489562 SLFN12Q8IYM2 578 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 SCFD2Q8WU76 684 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 LENG9Q96B70 501 aa15.73■□□□□ 0.11
C9orf3-221ENST00000489562 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms