RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 MAP4K1Q92918 833 aa23.33■■□□□ 1.33
CACFD1-205ENST00000489519 EMID1Q96A84 441 aaPredicted RBP23.33■■□□□ 1.33
CACFD1-205ENST00000489519 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.33
CACFD1-205ENST00000489519 NOD1Q9Y239 953 aa23.33■■□□□ 1.33
CACFD1-205ENST00000489519 CHD9Q3L8U1 2897 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 LAMC2Q13753 1193 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 DGKDQ16760 1214 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 KCNV1Q6PIU1 500 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 CHST3Q7LGC8 479 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 VWCEQ96DN2 955 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 GAS2L1Q99501 681 aaPredicted RBP23.32■■□□□ 1.32
CACFD1-205ENST00000489519 SLC28A3Q9HAS3 691 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
CACFD1-205ENST00000489519 ACTN1P12814 892 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 CHMP4BP1P59074 171 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 TROAPQ12815 778 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 CATIPQ7Z7H3 387 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 SESTD1Q86VW0 696 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 HOMER1Q86YM7 354 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 PIGSQ96S52 555 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 PDCD2LQ9BRP1 358 aa23.31■■□□□ 1.32
CACFD1-205ENST00000489519 COL25A1Q9BXS0 654 aaPredicted RBP23.31■■□□□ 1.32
CACFD1-205ENST00000489519 BAZ2BQ9UIF8 2168 aaKnown RBP23.31■■□□□ 1.32
CACFD1-205ENST00000489519 PNMA6FA0A0J9YX94 578 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 ZBBXA8MT70 800 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 IQCF3P0C7M6 154 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 PTGISQ16647 500 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 DEFB128Q7Z7B8 93 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 VSIG10LQ86VR7 867 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 CCDC155Q8N6L0 562 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 PPP1R13LQ8WUF5 828 aa23.3■■□□□ 1.32
CACFD1-205ENST00000489519 GCOM1H8Y6P7 765 aaPredicted RBP23.29■■□□□ 1.32
CACFD1-205ENST00000489519 POLR2MP0CAP2 368 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 MYCLP12524 364 aaPredicted RBP23.29■■□□□ 1.32
CACFD1-205ENST00000489519 HOXA13P31271 388 aaPredicted RBP23.29■■□□□ 1.32
CACFD1-205ENST00000489519 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 DHX37Q8IY37 1157 aaKnown RBP23.29■■□□□ 1.32
CACFD1-205ENST00000489519 PPTC7Q8NI37 304 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 IGDCC4Q8TDY8 1250 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 KAT2BQ92831 832 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 SENP2Q9HC62 589 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 PCDHA11Q9Y5I1 949 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 TAF6LQ9Y6J9 622 aa23.29■■□□□ 1.32
CACFD1-205ENST00000489519 MYH7BA7E2Y1 1941 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 CYTH3O43739 400 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 TGFB3P10600 412 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 ATP2A2P16615 1042 aaKnown RBP23.28■■□□□ 1.32
CACFD1-205ENST00000489519 CAGE1Q8TC20 777 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 MAP3K14Q99558 947 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 KATNAL1Q9BW62 490 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 NKX2-4Q9H2Z4 354 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 PRDM12Q9H4Q4 367 aa23.28■■□□□ 1.32
CACFD1-205ENST00000489519 YBX2Q9Y2T7 364 aaKnown RBP23.28■■□□□ 1.32
CACFD1-205ENST00000489519 RBM8AQ9Y5S9 174 aaKnown RBP23.28■■□□□ 1.32
CACFD1-205ENST00000489519 SCN5AQ14524 2016 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 PPFIA4O75335 1185 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 PGM5Q15124 567 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 MB21D2Q8IYB1 491 aaPredicted RBP23.27■■□□□ 1.32
CACFD1-205ENST00000489519 C7orf31Q8N865 590 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 MTA3Q9BTC8 594 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 GBF1Q92538 1859 aa23.27■■□□□ 1.32
CACFD1-205ENST00000489519 TRIP12Q14669 1992 aaPredicted RBP23.27■■□□□ 1.32
CACFD1-205ENST00000489519 RGS20O76081 388 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 CCND2P30279 289 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 RABGGTBP53611 331 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 ANTXR2P58335 489 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 MYSM1Q5VVJ2 828 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 GDF6Q6KF10 455 aaPredicted RBP23.26■■□□□ 1.31
CACFD1-205ENST00000489519 PHOSPHO2Q8TCD6 241 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 AFAP1L1Q8TED9 768 aa23.26■■□□□ 1.31
CACFD1-205ENST00000489519 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.31
CACFD1-205ENST00000489519 PARNO95453 639 aaKnown RBP23.25■■□□□ 1.31
CACFD1-205ENST00000489519 HOXD8P13378 290 aaPredicted RBP23.25■■□□□ 1.31
CACFD1-205ENST00000489519 KIF5BP33176 963 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 PSEN2P49810 448 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 CELF3Q5SZQ8 465 aaKnown RBP23.25■■□□□ 1.31
CACFD1-205ENST00000489519 FCHSD1Q86WN1 690 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 TMTC2Q8N394 836 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 CHD7Q9P2D1 2997 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 GTF2IRD1Q9UHL9 959 aa23.25■■□□□ 1.31
CACFD1-205ENST00000489519 F2P00734 622 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 MFSD10Q14728 455 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 PPP2R2DQ66LE6 453 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 CASC1Q6TDU7 716 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 IL31RAQ8NI17 732 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
CACFD1-205ENST00000489519 SPATA33Q96N06 139 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 CTAGE1Q96RT6 745 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 SLC9A7Q96T83 725 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 HDAC6Q9UBN7 1215 aa23.24■■□□□ 1.31
CACFD1-205ENST00000489519 HAS3O00219 553 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 STAM2O75886 525 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 DDAH1O94760 285 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 BAIAP3O94812 1187 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 SELPP16109 830 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 MCM5P33992 734 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 RBL2Q08999 1139 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 KIAA0753Q2KHM9 967 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms