RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 MBD4O95243 580 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 LTBRP36941 435 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 SMAD2Q15796 467 aaKnown RBP11□□□□□ -0.65
SSBP1-212ENST00000489378 CLUL1Q15846 466 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 CNKSR3Q6P9H4 555 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 PRRX2Q99811 253 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 VTA1Q9NP79 307 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 ATP8A2Q9NTI2 1148 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 CLDND1Q9NY35 253 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 NYAP2Q9P242 653 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 FEM1BQ9UK73 627 aa11□□□□□ -0.65
SSBP1-212ENST00000489378 GVINP1Q7Z2Y8 2422 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 MYH4Q9Y623 1939 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 NBNO60934 754 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 CXCL10P02778 98 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 SELPP16109 830 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 CPT1AP50416 773 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 ATP8B2P98198 1209 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 E2F4Q16254 413 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 PTPROQ16827 1216 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
SSBP1-212ENST00000489378 NYAP1Q6ZVC0 841 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 SUGP1Q8IWZ8 645 aaKnown RBP10.99□□□□□ -0.65
SSBP1-212ENST00000489378 OR6J1Q8NGC5 347 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 DHX38Q92620 1227 aaKnown RBP10.99□□□□□ -0.65
SSBP1-212ENST00000489378 WDR11Q9BZH6 1224 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 CLIP2Q9UDT6 1046 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 NOD1Q9Y239 953 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
SSBP1-212ENST00000489378 CACNA1GO43497 2377 aa10.99□□□□□ -0.65
SSBP1-212ENST00000489378 ATG2AQ2TAZ0 1938 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 DMDP11532 3685 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 GOLIM4O00461 696 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 MAP3K7O43318 606 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 RASA1P20936 1047 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 VCPP55072 806 aaKnown RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 DLX2Q07687 328 aaPredicted RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 TTF1Q15361 905 aaPredicted RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 PTGISQ16647 500 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 CTR9Q6PD62 1173 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 LRRC8DQ7L1W4 858 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 AMOTL1Q8IY63 956 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 STK11IPQ8N1F8 1099 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 FBXL6Q8N531 539 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 MORC4Q8TE76 937 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 ATOH1Q92858 354 aaPredicted RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 POP1Q99575 1024 aaKnown RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
SSBP1-212ENST00000489378 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
SSBP1-212ENST00000489378 MICAL3Q7RTP6 2002 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 MBTPS2O43462 519 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 CHGBP05060 677 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 ALAS1P13196 640 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 RARSP54136 660 aaKnown RBP10.97□□□□□ -0.65
SSBP1-212ENST00000489378 GPM6BQ13491 265 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 PKN1Q16512 942 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
SSBP1-212ENST00000489378 ASCL5Q7RTU5 278 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 ERMP1Q7Z2K6 904 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 AACSQ86V21 672 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
SSBP1-212ENST00000489378 LRRC47Q8N1G4 583 aaKnown RBP10.97□□□□□ -0.65
SSBP1-212ENST00000489378 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 CAGE1Q8TC20 777 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 C1orf115Q9H7X2 142 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 INSL6Q9Y581 213 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 COL4A6Q14031 1691 aa10.97□□□□□ -0.65
SSBP1-212ENST00000489378 IGKV6D-41A0A0C4DH26 115 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 RBM47A0AV96 593 aaKnown RBP10.96□□□□□ -0.65
SSBP1-212ENST00000489378 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 H3BNC9 293 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 TRIM27P14373 513 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 SNAP25P60880 206 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 HTRA4P83105 476 aaPredicted RBP10.96□□□□□ -0.65
SSBP1-212ENST00000489378 IKBKEQ14164 716 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 COPS5Q92905 334 aa10.96□□□□□ -0.65
SSBP1-212ENST00000489378 DNAJC2Q99543 621 aaKnown RBP10.96□□□□□ -0.65
SSBP1-212ENST00000489378 VPS13AQ96RL7 3174 aa10.96□□□□□ -0.66
SSBP1-212ENST00000489378 A6NJR5 290 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 TMEM232C9JQI7 657 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 H0Y858 1186 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 STXBP3O00186 592 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms