RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 CCDC194A0A1B0GVG4 234 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 H3BQV1 296 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 GJB1P08034 283 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 CCL5P13501 91 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 CIITAP33076 1130 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 TRIM32Q13049 653 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.63
FDPS-214ENST00000489324 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
FDPS-214ENST00000489324 TAPT1Q6NXT6 567 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 MOXD1Q6UVY6 613 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 DIS3L2Q8IYB7 885 aaKnown RBP11.14□□□□□ -0.63
FDPS-214ENST00000489324 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 INPP4AQ96PE3 977 aaPredicted RBP11.14□□□□□ -0.63
FDPS-214ENST00000489324 RNF208Q9H0X6 261 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
FDPS-214ENST00000489324 FIBPO43427 364 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
FDPS-214ENST00000489324 RARBP10826 455 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 MYCLP12524 364 aaPredicted RBP11.13□□□□□ -0.63
FDPS-214ENST00000489324 CNGA1P29973 690 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 ZNF76P36508 570 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
FDPS-214ENST00000489324 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 CEP55Q53EZ4 464 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 FBXO16Q8IX29 292 aaPredicted RBP11.13□□□□□ -0.63
FDPS-214ENST00000489324 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
FDPS-214ENST00000489324 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 ABHD8Q96I13 439 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 SPC25Q9HBM1 224 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 UBIAD1Q9Y5Z9 338 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
FDPS-214ENST00000489324 CYP3A7-CYP3A51PA0A087WV96 503 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 BTBD18B2RXH4 712 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 SPATA31C2B4DYI2 1134 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 SGPL1O95470 568 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 GCFC2P16383 781 aaKnown RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 CYP3A7P24462 503 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.63
FDPS-214ENST00000489324 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 GJA8P48165 433 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 NKX3-2P78367 333 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 MRPS9P82933 396 aaKnown RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 ORC2Q13416 577 aaPredicted RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 GNL2Q13823 731 aaKnown RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 NEDD9Q14511 834 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 MTFR1Q15390 333 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 EEPD1Q7L9B9 569 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 NEK8Q86SG6 692 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 TBCKQ8TEA7 893 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 MXRA8Q9BRK3 442 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 WDR11Q9BZH6 1224 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 MRVI1Q9Y6F6 885 aa11.12□□□□□ -0.63
FDPS-214ENST00000489324 RBBP6Q7Z6E9 1792 aaKnown RBP11.12□□□□□ -0.63
FDPS-214ENST00000489324 ZNFX1Q9P2E3 1918 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 MEIS1O00470 390 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 ZEB2O60315 1214 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 MTMR1Q13613 665 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 BRDTQ58F21 947 aaPredicted RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 LHX8Q68G74 356 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 PPP4R3AQ6IN85 833 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 CCDC62Q6P9F0 684 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 SEPT14Q6ZU15 432 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 PIK3AP1Q6ZUJ8 805 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 NOSTRINQ8IVI9 506 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 OGDHLQ9ULD0 1010 aa11.11□□□□□ -0.63
FDPS-214ENST00000489324 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
FDPS-214ENST00000489324 RGS20O76081 388 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 GH1P01241 217 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 SMPD1P17405 629 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 ITGB5P18084 799 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
FDPS-214ENST00000489324 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 GJA9P57773 515 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
FDPS-214ENST00000489324 NR5A1Q13285 461 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms