RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 B4DLN1 442 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 MMP3P08254 477 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 DEFB103AP81534 67 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 ARHGAP1Q07960 439 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 TCTN1Q2MV58 587 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 SEPT14Q6ZU15 432 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 ZNF589Q86UQ0 364 aaPredicted RBP12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 KAT2BQ92831 832 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 UBA5Q9GZZ9 404 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 MTUS1Q9ULD2 1270 aa12.67□□□□□ -0.38
PTP4A2-206ENST00000489313 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 SELPP16109 830 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 MCMDC2Q4G0Z9 681 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 ANKRD45Q5TZF3 282 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 LRRC8DQ7L1W4 858 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 ZKSCAN3Q9BRR0 538 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
PTP4A2-206ENST00000489313 NBNO60934 754 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 GH1P01241 217 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 SYTL5Q8TDW5 730 aaPredicted RBP12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 TTC14Q96N46 770 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 SIP14410 1827 aa12.65□□□□□ -0.38
PTP4A2-206ENST00000489313 FAM86C2PA6NEL3 165 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CKBP12277 381 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 PDE1AP54750 535 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 NMIQ13287 307 aaPredicted RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CNKSR3Q6P9H4 555 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 NEDD4P46934 1319 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 GJB5O95377 273 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CXCL10P02778 98 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 GPATCH4Q5T3I0 446 aaKnown RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 WNT8BQ93098 351 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 RAD9AQ99638 391 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 ALG1Q9BT22 464 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 ABCB11O95342 1321 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
PTP4A2-206ENST00000489313 LAMA4Q16363 1823 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 ZNF286BP0CG31 522 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 PSEN2P49810 448 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 ERVK-21P61565 698 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 RBL2Q08999 1139 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 STXBP2Q15833 593 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 DGKDQ16760 1214 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 DDX41Q9UJV9 622 aaKnown RBP12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
PTP4A2-206ENST00000489313 ABHD14A-ACY1A0A1B0GW23 586 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 LINC01553A4QN01 128 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 SORBS3O60504 671 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 MFSD10Q14728 455 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 QRICH1Q2TAL8 776 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 ARHGEF16Q5VV41 709 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 ESR2Q92731 530 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 IWS1Q96ST2 819 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 UBE2ZQ9H832 354 aaPredicted RBP12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
PTP4A2-206ENST00000489313 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
PTP4A2-206ENST00000489313 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
PTP4A2-206ENST00000489313 F2P00734 622 aa12.61□□□□□ -0.39
PTP4A2-206ENST00000489313 PTK7Q13308 1070 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms