RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 CNGA1P29973 690 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GJA8P48165 433 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 USP11P51784 963 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SAFBQ15424 915 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GNPTABQ3T906 1256 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 JAKMIP3Q5VZ66 844 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 LHX8Q68G74 356 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 KRT40Q6A162 431 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 KRT25Q7Z3Z0 450 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CRYGNQ8WXF5 182 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 INPP4AQ96PE3 977 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 KCNJ14Q9UNX9 436 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GJB2P29033 226 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ICAM3P32942 547 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 KRT2P35908 639 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 MRPS9P82933 396 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 TTLL4Q14679 1199 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DUSP28Q4G0W2 176 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CDHR1Q96JP9 859 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CRISPLD2Q9H0B8 497 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
CDK5RAP1-214ENST00000488723 RARBP10826 455 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 PDIA4P13667 645 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 PDCP20941 246 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NKX3-2P78367 333 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ARHGAP4P98171 946 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 TNFAIP2Q03169 654 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 EEPD1Q7L9B9 569 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NIPA1Q7RTP0 329 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NLRX1Q86UT6 975 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 IL31RAQ8NI17 732 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GPRASP2Q96D09 838 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DEFB118Q96PH6 123 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 WDR11Q9BZH6 1224 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 OGDHLQ9ULD0 1010 aa19.48■□□□□ 0.71
CDK5RAP1-214ENST00000488723 RGS20O76081 388 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CIITAP33076 1130 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ANKLE1Q8NAG6 615 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ARRDC4Q8NCT1 418 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 U2AF1L4Q8WU68 220 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 GNEQ9Y223 722 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 UBIAD1Q9Y5Z9 338 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CCDC194A0A1B0GVG4 234 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SPATA31C2B4DYI2 1134 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DTNBO60941 627 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ADCYAP1R1P41586 468 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NONOQ15233 471 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CEP55Q53EZ4 464 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 MOXD1Q6UVY6 613 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SEPT14Q6ZU15 432 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DIS3L2Q8IYB7 885 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 TNFRSF25Q93038 417 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NAP1L4Q99733 375 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SENP7Q9BQF6 1050 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SPC25Q9HBM1 224 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 JADE2Q9NQC1 790 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 PDGFCQ9NRA1 345 aa19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DDX49Q9Y6V7 483 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP1-214ENST00000488723 MEIS1O00470 390 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 ADAMTS3O15072 1205 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 FIBPO43427 364 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 MYCP01106 439 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 SMPD1P17405 629 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 GJA9P57773 515 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 BECN1Q14457 450 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 LARP1BQ659C4 914 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 GIMAP8Q8ND71 665 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 RASGRP4Q8TDF6 673 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 MXRA8Q9BRK3 442 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 UPF3AQ9H1J1 476 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 MRVI1Q9Y6F6 885 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 MYH7BA7E2Y1 1941 aa19.45■□□□□ 0.7
CDK5RAP1-214ENST00000488723 CYP3A7-CYP3A51PA0A087WV96 503 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 CCDC85CA6NKD9 419 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 BTBD18B2RXH4 712 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 TFRCP02786 760 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 ITGB5P18084 799 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 CYP3A7P24462 503 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 OXER1Q8TDS5 423 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 TBCKQ8TEA7 893 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 EMID1Q96A84 441 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 RTEL1Q9NZ71 1219 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 BRCA2P51587 3418 aa19.44■□□□□ 0.7
CDK5RAP1-214ENST00000488723 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.71e-6■□□□□ 9.6
CDK5RAP1-214ENST00000488723 CST5P28325 142 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP1-214ENST00000488723 ZNF76P36508 570 aa19.43■□□□□ 0.7
CDK5RAP1-214ENST00000488723 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP1-214ENST00000488723 MTMR1Q13613 665 aa19.43■□□□□ 0.7
CDK5RAP1-214ENST00000488723 NEDD9Q14511 834 aa19.43■□□□□ 0.7
CDK5RAP1-214ENST00000488723 RNF180Q86T96 592 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms