RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 MOXD2PA6NHM9 499 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 PFKFB2O60825 505 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 STAM2O75886 525 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 ACLYP53396 1101 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 NKX3-2P78367 333 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 KCNA10Q16322 511 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-207ENST00000488591 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 C6orf50Q9HD87 102 aa17.28■□□□□ 0.36
CXCL12-207ENST00000488591 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 TNRC18O15417 2968 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-207ENST00000488591 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-207ENST00000488591 GNA11P29992 359 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 SCRN1Q12765 414 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 PKN1Q16512 942 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
CXCL12-207ENST00000488591 UBE2SQ16763 222 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 GNPTABQ3T906 1256 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 CCDC148Q8NFR7 591 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 OR6J1Q8NGC5 347 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
CXCL12-207ENST00000488591 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 MYADML2A6NDP7 307 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 DEXIO95424 95 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 ASGR1P07306 291 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 CPT1AP50416 773 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 ATN1P54259 1190 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-207ENST00000488591 BEX3Q00994 111 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 PCNX4Q63HM2 1172 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 MCTP2Q6DN12 878 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 CCSAPQ6IQ19 270 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-207ENST00000488591 TYW1BQ6NUM6 668 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 IL27Q8NEV9 243 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 VTI1AQ96AJ9 217 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 PCDHA6Q9UN73 950 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 PCDHA8Q9Y5H6 950 aa17.26■□□□□ 0.35
CXCL12-207ENST00000488591 PDE4DIPQ5VU43 2346 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 A0A1W2PQ45 241 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-207ENST00000488591 A0A1W2PQY0 241 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 CABYRO75952 493 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 GH1P01241 217 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 TGFB3P10600 412 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 LY6KQ17RY6 165 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 TMEM63BQ5T3F8 832 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 CCDC62Q6P9F0 684 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 STARD7Q9NQZ5 370 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-207ENST00000488591 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
CXCL12-207ENST00000488591 CTAGE5O15320 804 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 ARIH2O95376 493 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 RABEP1Q15276 862 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 ME3Q16798 604 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 LRRC26Q2I0M4 334 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 COPS5Q92905 334 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 KIF2CQ99661 725 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
CXCL12-207ENST00000488591 DDX41Q9UJV9 622 aaKnown RBP17.24■□□□□ 0.35
CXCL12-207ENST00000488591 ELP1O95163 1332 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 KPNA6O60684 536 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 XBP1P17861 261 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 PTGS1P23219 599 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 NLRP5P59047 1200 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 PRPF38BQ5VTL8 546 aaKnown RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 C7orf61Q8IZ16 206 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 WASF1Q92558 559 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-207ENST00000488591 VPS54Q9P1Q0 977 aa17.23■□□□□ 0.35
CXCL12-207ENST00000488591 FIBPO43427 364 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 RGS20O76081 388 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 ICAM3P32942 547 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
CXCL12-207ENST00000488591 RTP1P59025 263 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 JAKMIP3Q5VZ66 844 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-207ENST00000488591 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms