RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
C9orf3-219ENST00000488186 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
C9orf3-219ENST00000488186 STAM2O75886 525 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-219ENST00000488186 GJB2P29033 226 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 KRT2P35908 639 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 CLK2P49760 499 aaKnown RBP17.97■□□□□ 0.47
C9orf3-219ENST00000488186 TNFAIP2Q03169 654 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
C9orf3-219ENST00000488186 GNPTABQ3T906 1256 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 ANO1Q5XXA6 986 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 PCNX4Q63HM2 1172 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 RASGRP4Q8TDF6 673 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 SCFD2Q8WU76 684 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 SPC25Q9HBM1 224 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 GJB4Q9NTQ9 266 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 OGDHLQ9ULD0 1010 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 MCM3APO60318 1980 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 PDE4DIPQ5VU43 2346 aa17.97■□□□□ 0.47
C9orf3-219ENST00000488186 LCTP09848 1927 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 CCDC194A0A1B0GVG4 234 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 ADCYAP1R1P41586 468 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 GUCY1B3Q02153 619 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 CUL4AQ13619 759 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 TTLL4Q14679 1199 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 LHX8Q68G74 356 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 KRT40Q6A162 431 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 UBE2Q1Q7Z7E8 422 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 NLRX1Q86UT6 975 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 DAGLBQ8NCG7 672 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 IL31RAQ8NI17 732 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 ZFP91Q96JP5 570 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-219ENST00000488186 WDR11Q9BZH6 1224 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 PDGFCQ9NRA1 345 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
C9orf3-219ENST00000488186 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.46
C9orf3-219ENST00000488186 H3BQV1 296 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 TXNP10599 105 aaKnown RBP17.95■□□□□ 0.46
C9orf3-219ENST00000488186 EN2P19622 333 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-219ENST00000488186 TAPT1Q6NXT6 567 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 KCNV1Q6PIU1 500 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 KRT25Q7Z3Z0 450 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 SHISA4Q96DD7 197 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 KATNBL1Q9H079 304 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 AP5M1Q9H0R1 490 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 FRMPD3Q5JV73 1810 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 FRMPD4Q14CM0 1322 aa17.95■□□□□ 0.46
C9orf3-219ENST00000488186 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
C9orf3-219ENST00000488186 MMP1P03956 469 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 SREBF1P36956 1147 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 BECN1Q14457 450 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 NONOQ15233 471 aaKnown RBP eCLIP17.94■□□□□ 0.46
C9orf3-219ENST00000488186 ARRDC4Q8NCT1 418 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
C9orf3-219ENST00000488186 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
C9orf3-219ENST00000488186 ADAMTS3O15072 1205 aa17.93■□□□□ 0.46
C9orf3-219ENST00000488186 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 DYNC1LI2O43237 492 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 MRPS9P82933 396 aaKnown RBP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 MLLT1Q03111 559 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 DIS3L2Q8IYB7 885 aaKnown RBP17.93■□□□□ 0.46
C9orf3-219ENST00000488186 FBXO18Q8NFZ0 1043 aa17.93■□□□□ 0.46
C9orf3-219ENST00000488186 CDHR1Q96JP9 859 aa17.93■□□□□ 0.46
C9orf3-219ENST00000488186 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-219ENST00000488186 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
C9orf3-219ENST00000488186 SMPD1P17405 629 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 PDCP20941 246 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 RNF180Q86T96 592 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 OXER1Q8TDS5 423 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 TBCKQ8TEA7 893 aa17.92■□□□□ 0.46
C9orf3-219ENST00000488186 BTBD18B2RXH4 712 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 FIBPO43427 364 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 C6orf222P0C671 652 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-219ENST00000488186 TGFB3P10600 412 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 USP11P51784 963 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 MTMR1Q13613 665 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 NPY5RQ15761 445 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 CEP55Q53EZ4 464 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 BRDTQ58F21 947 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-219ENST00000488186 MCTP1Q6DN14 999 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 TLK2Q86UE8 772 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 DHX37Q8IY37 1157 aaKnown RBP17.91■□□□□ 0.46
C9orf3-219ENST00000488186 OR6J1Q8NGC5 347 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 LENG1Q96BZ8 264 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-219ENST00000488186 GPRASP2Q96D09 838 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-219ENST00000488186 MXRA8Q9BRK3 442 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 Q9Y3F1 56 aa17.91■□□□□ 0.46
C9orf3-219ENST00000488186 KBTBD13C9JR72 458 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 M0R2N6 131 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms