RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 ARHGAP4P98171 946 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 TRIM32Q13049 653 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 PRAMEF19Q5SWL8 479 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 COL13A1Q5TAT6 717 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 IQSEC1Q6DN90 963 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 TGFB3P10600 412 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 SYT1P21579 422 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 U2AF2P26368 475 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL4A6-207ENST00000487645 NR5A1Q13285 461 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 KCNV1Q6PIU1 500 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 TBCKQ8TEA7 893 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 ZNF333Q96JL9 665 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 PGBD1Q96JS3 809 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
COL4A6-207ENST00000487645 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
COL4A6-207ENST00000487645 MAFGO15525 162 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 SEPT4O43236 478 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 CIITAP33076 1130 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 GNL2Q13823 731 aaKnown RBP15.17■□□□□ 0.02
COL4A6-207ENST00000487645 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 NIPA1Q7RTP0 329 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
COL4A6-207ENST00000487645 ZHX1Q9UKY1 873 aaPredicted RBP15.17■□□□□ 0.02
COL4A6-207ENST00000487645 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
COL4A6-207ENST00000487645 UBIAD1Q9Y5Z9 338 aa15.17■□□□□ 0.02
COL4A6-207ENST00000487645 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 MEIS1O00470 390 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 MSCO60682 206 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 RGS20O76081 388 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CCL5P13501 91 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 AKR1A1P14550 325 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 ITGB5P18084 799 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CYP3A7P24462 503 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CNGA1P29973 690 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
COL4A6-207ENST00000487645 ICAM3P32942 547 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 ZNF76P36508 570 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 NLRX1Q86UT6 975 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 NOSTRINQ8IVI9 506 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 FBXO16Q8IX29 292 aaPredicted RBP15.16■□□□□ 0.02
COL4A6-207ENST00000487645 GPRASP2Q96D09 838 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 NAP1L4Q99733 375 aaKnown RBP15.16■□□□□ 0.02
COL4A6-207ENST00000487645 MXRA8Q9BRK3 442 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
COL4A6-207ENST00000487645 SPATA31C2B4DYI2 1134 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 STX6O43752 255 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 EDIL3O43854 480 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 CAPN2P17655 700 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 TNFAIP2Q03169 654 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 TTLL4Q14679 1199 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 INF2Q27J81 1249 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 EARS2Q5JPH6 523 aaKnown RBP15.15■□□□□ 0.02
COL4A6-207ENST00000487645 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 CCDC62Q6P9F0 684 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 WDR11Q9BZH6 1224 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL4A6-207ENST00000487645 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 UNC93B1Q9H1C4 597 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-207ENST00000487645 PDGFCQ9NRA1 345 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-207ENST00000487645 Q9Y3F1 56 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 FRMPD3Q5JV73 1810 aa15.15■□□□□ 0.02
COL4A6-207ENST00000487645 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 FIBPO43427 364 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 DUSP11O75319 330 aaKnown RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 TXNP10599 105 aaKnown RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 MTFR1Q15390 333 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 DUSP28Q4G0W2 176 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 PPP4R3AQ6IN85 833 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 SENP7Q9BQF6 1050 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 DDX20Q9UHI6 824 aaKnown RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 DDX41Q9UJV9 622 aaKnown RBP15.14■□□□□ 0.01
COL4A6-207ENST00000487645 MTMR6Q9Y217 621 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 DOCK5Q9H7D0 1870 aa15.14■□□□□ 0.01
COL4A6-207ENST00000487645 IGLV3-22A0A075B6J6 115 aa15.13■□□□□ 0.01
COL4A6-207ENST00000487645 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-207ENST00000487645 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
COL4A6-207ENST00000487645 FAM86B1E9PN63 330 aa15.13■□□□□ 0.01
COL4A6-207ENST00000487645 GJB1P08034 283 aa15.13■□□□□ 0.01
COL4A6-207ENST00000487645 FAM86B2P0C5J1 330 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms