RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 BIN2Q9UBW5 565 aaPredicted RBP4.8□□□□□ -1.64
USP9X-208ENST00000487625 USTQ9Y2C2 406 aa4.8□□□□□ -1.64
USP9X-208ENST00000487625 PCDHB14Q9Y5E9 798 aa4.8□□□□□ -1.64
USP9X-208ENST00000487625 SLC4A7Q9Y6M7 1214 aa4.8□□□□□ -1.64
USP9X-208ENST00000487625 C9IYK1 514 aa4.79□□□□□ -1.64
USP9X-208ENST00000487625 ACRV1P26436 265 aa4.79□□□□□ -1.64
USP9X-208ENST00000487625 ZNF445P59923 1031 aa4.79□□□□□ -1.64
USP9X-208ENST00000487625 PRIMA1Q86XR5 153 aa4.79□□□□□ -1.64
USP9X-208ENST00000487625 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
USP9X-208ENST00000487625 TMEFF2Q9UIK5 374 aaPredicted RBP4.79□□□□□ -1.64
USP9X-208ENST00000487625 ATE1O95260 518 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 RALYLQ86SE5 291 aaKnown RBP4.78□□□□□ -1.64
USP9X-208ENST00000487625 BRF1Q92994 677 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP9X-208ENST00000487625 CROTQ9UKG9 612 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 AK5Q9Y6K8 562 aa4.78□□□□□ -1.64
USP9X-208ENST00000487625 COL6A1P12109 1028 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 ZNF37AP17032 561 aaPredicted RBP4.77□□□□□ -1.65
USP9X-208ENST00000487625 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 FIBCD1Q8N539 461 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 NUDT10Q8NFP7 164 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 CLIC6Q96NY7 704 aa4.77□□□□□ -1.65
USP9X-208ENST00000487625 A0A0A6YYK5 440 aaPredicted RBP4.76□□□□□ -1.65
USP9X-208ENST00000487625 ARID3CA6NKF2 412 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 TLR3O15455 904 aaKnown RBP4.76□□□□□ -1.65
USP9X-208ENST00000487625 TRMT10BQ6PF06 316 aaKnown RBP4.76□□□□□ -1.65
USP9X-208ENST00000487625 CPNE8Q86YQ8 564 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 PLEKHO2Q8TD55 490 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 MCMBPQ9BTE3 642 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 AP5M1Q9H0R1 490 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 BRMS1Q9HCU9 246 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 FHOD1Q9Y613 1164 aa4.76□□□□□ -1.65
USP9X-208ENST00000487625 TNFRSF10CO14798 259 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 RAD17O75943 681 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 NUDT3O95989 172 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 FUCA1P04066 466 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 LDHBP07195 334 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 P4HBP07237 508 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 NME1P15531 152 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 GARTP22102 1010 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 PROZP22891 400 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 NKX3-2P78367 333 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 FSTL1Q12841 308 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 EEF1DP3Q658K8 133 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 CCDC144CPQ8IYA2 1237 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 RPUSD2Q8IZ73 545 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 GOLM1Q8NBJ4 401 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 GPR150Q8NGU9 434 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 GP6Q9HCN6 339 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 NGRNQ9NPE2 291 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 RNF19AQ9NV58 838 aa4.75□□□□□ -1.65
USP9X-208ENST00000487625 SUCOQ9UBS9 1254 aaKnown RBP4.75□□□□□ -1.65
USP9X-208ENST00000487625 CYP7B1O75881 506 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 SNAP47Q5SQN1 464 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 DCAF15Q66K64 600 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 FAM196AQ6ZSG2 479 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 NEIL1Q96FI4 390 aaPredicted RBP4.74□□□□□ -1.65
USP9X-208ENST00000487625 BRIP1Q9BX63 1249 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 KRTAP1-5Q9BYS1 174 aa4.74□□□□□ -1.65
USP9X-208ENST00000487625 ZNF703Q9H7S9 590 aaPredicted RBP4.74□□□□□ -1.65
USP9X-208ENST00000487625 REXO2Q9Y3B8 237 aaKnown RBP4.74□□□□□ -1.65
USP9X-208ENST00000487625 KLHL18O94889 574 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 GJA4P35212 333 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 ST13P50502 369 aaKnown RBP4.73□□□□□ -1.65
USP9X-208ENST00000487625 NOL9Q5SY16 702 aaKnown RBP4.73□□□□□ -1.65
USP9X-208ENST00000487625 LAIR1Q6GTX8 287 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 POLNQ7Z5Q5 900 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 TMEM74Q96NL1 305 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 BBC3Q96PG8 261 aaPredicted RBP4.73□□□□□ -1.65
USP9X-208ENST00000487625 SLC9A7Q96T83 725 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 CEP72Q9P209 647 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 WASF3Q9UPY6 502 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
USP9X-208ENST00000487625 AURKAO14965 403 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 CSF2RBP32927 897 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 TAF1CQ15572 869 aaPredicted RBP4.72□□□□□ -1.65
USP9X-208ENST00000487625 CWF19L2Q2TBE0 894 aaKnown RBP4.72□□□□□ -1.65
USP9X-208ENST00000487625 TDRD10Q5VZ19 366 aaKnown RBP4.72□□□□□ -1.65
USP9X-208ENST00000487625 GAREM2Q75VX8 874 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 GPR155Q7Z3F1 870 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 ZNF808Q8N4W9 903 aaPredicted RBP4.72□□□□□ -1.65
USP9X-208ENST00000487625 SEC14L1Q92503 715 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 FAM89AQ96GI7 184 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 ZDHHC15Q96MV8 337 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 EHMT1Q9H9B1 1298 aa4.72□□□□□ -1.65
USP9X-208ENST00000487625 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
USP9X-208ENST00000487625 C7orf72A4D263 438 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 LMNAP02545 664 aaKnown RBP4.71□□□□□ -1.66
USP9X-208ENST00000487625 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 ANKRD39Q53RE8 183 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 Q6ZUG5 572 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 MILR1Q7Z6M3 343 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 PPFIBP1Q86W92 1011 aa4.71□□□□□ -1.66
USP9X-208ENST00000487625 ZSCAN29Q8IWY8 852 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms