RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
NEK4-204ENST00000487068 NID2Q14112 1375 aa11.75□□□□□ -0.53
NEK4-204ENST00000487068 TRIP12Q14669 1992 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 A0A1W2PQ45 241 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 A0A1W2PQY0 241 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 ZEB2O60315 1214 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 SEC24BO95487 1268 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 ASGR1P07306 291 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 NR3C2P08235 984 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 TXNP10599 105 aaKnown RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 COL6A1P12109 1028 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 SYN1P17600 705 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 PTGS1P23219 599 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 EDNRBP24530 442 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 ADCY7P51828 1080 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 ACLYP53396 1101 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 RTP1P59025 263 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 PGM5Q15124 567 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 KCNA10Q16322 511 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 UBE2SQ16763 222 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 LRRC26Q2I0M4 334 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 WWC2Q6AWC2 1192 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 TAPT1Q6NXT6 567 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 TRIM22Q8IYM9 498 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
NEK4-204ENST00000487068 PHKBQ93100 1093 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 GLT1D1Q96MS3 346 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 AGXT2Q9BYV1 514 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 EHMT1Q9H9B1 1298 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 SCN10AQ9Y5Y9 1956 aa11.74□□□□□ -0.53
NEK4-204ENST00000487068 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 SCG2P13521 617 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 CPT1AP50416 773 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 GJA9P57773 515 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 GHRHRQ02643 423 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 FSCN1Q16658 493 aaKnown RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 DUSP28Q4G0W2 176 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 IL31RAQ8NI17 732 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 UPF3AQ9H1J1 476 aaKnown RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 PHF24Q9UPV7 400 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
NEK4-204ENST00000487068 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
NEK4-204ENST00000487068 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 STXBP3O00186 592 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.53
NEK4-204ENST00000487068 SORBS3O60504 671 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 MYL3P08590 195 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 NEK4P51957 841 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 AK2P54819 239 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 TRIM60Q495X7 471 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 TMEM63BQ5T3F8 832 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 COPS5Q92905 334 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
NEK4-204ENST00000487068 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 BARHL2Q9NY43 387 aa11.72□□□□□ -0.53
NEK4-204ENST00000487068 SMCO2A6NFE2 343 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 PIK3CDO00329 1044 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 MEIS2O14770 477 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 PQBP1O60828 265 aaKnown RBP11.71□□□□□ -0.53
NEK4-204ENST00000487068 CDKL5O76039 1030 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 GH1P01241 217 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 FUT2Q10981 343 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 CXCL17Q6UXB2 119 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 KLHDC9Q8NEP7 349 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 ZNF274Q96GC6 653 aaPredicted RBP11.71□□□□□ -0.53
NEK4-204ENST00000487068 PGBD1Q96JS3 809 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
NEK4-204ENST00000487068 Q9Y3F1 56 aa11.71□□□□□ -0.53
NEK4-204ENST00000487068 FRMPD4Q14CM0 1322 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 MROH7Q68CQ1 1323 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms