RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 RAD51CO43502 376 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 FLT3P36888 993 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 TUBB4BP68371 445 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 PRPF4BQ13523 1007 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 MYH6P13533 1939 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CALM1P0DP23 149 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CALM2P0DP24 149 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CALM3P0DP25 149 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 KIF5BP33176 963 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 BRINP3Q76B58 766 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 OR52Z1P0C646 297 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 TNNI2P48788 182 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 PIGSQ96S52 555 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 MYH7P12883 1935 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 A0A087X0T9 212 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 TLDC2A0PJX2 215 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 GOLGA8KD6RF30 607 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 DDAH1O94760 285 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 FAM228BP0C875 321 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CALML3P27482 149 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CCDC170Q8IYT3 715 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
HSPG2-211ENST00000486901 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
HSPG2-211ENST00000486901 PDHBP11177 359 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 MAP2K2P36507 400 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 UBE2SQ16763 222 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 SHOX2O60902 331 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 CFAP221Q4G0U5 840 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 OPLAHO14841 1288 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 SLC37A4O43826 429 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 QPCTQ16769 361 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 C8orf37Q96NL8 207 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
HSPG2-211ENST00000486901 CHORDC1Q9UHD1 332 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-211ENST00000486901 COL1A1P02452 1464 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 TLR2O60603 784 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 ITGA4P13612 1032 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 TCERG1LQ5VWI1 586 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 SV2BQ7L1I2 683 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 FNBP4Q8N3X1 1017 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 SNX29Q8TEQ0 813 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 CALML4Q96GE6 196 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 CCDC114Q96M63 670 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 MYCBPQ99417 103 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 SH3GL2Q99962 352 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 MMTAG2Q9BU76 263 aaKnown RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 IKZF4Q9H2S9 585 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 MAD2L2Q9UI95 211 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 TCP1P17987 556 aaKnown RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 EPS15P42566 896 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 ARL6IP4Q66PJ3 421 aaKnown RBP13.65□□□□□ -0.22
HSPG2-211ENST00000486901 SLC30A10Q6XR72 485 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 SIK3Q9Y2K2 1263 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
HSPG2-211ENST00000486901 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.23
HSPG2-211ENST00000486901 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.23
HSPG2-211ENST00000486901 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.23
HSPG2-211ENST00000486901 DDX12PQ92771 950 aa13.65□□□□□ -0.23
HSPG2-211ENST00000486901 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.23
HSPG2-211ENST00000486901 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.23
HSPG2-211ENST00000486901 STXBP3O00186 592 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 KCNMA1Q12791 1236 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 SOGA3Q5TF21 947 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 TRMT1LQ7Z2T5 733 aaKnown RBP13.64□□□□□ -0.23
HSPG2-211ENST00000486901 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 AMACRQ9UHK6 382 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 NOVA2Q9UNW9 492 aaKnown RBP13.64□□□□□ -0.23
HSPG2-211ENST00000486901 FLT1P17948 1338 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms