RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 N4BP3O15049 544 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 EEF1GP26641 437 aaKnown RBP22.78■■□□□ 1.24
HPS3-206ENST00000486530 CCT6AP40227 531 aaKnown RBP22.78■■□□□ 1.24
HPS3-206ENST00000486530 KIAA1755Q5JYT7 1200 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 FAM83BQ5T0W9 1011 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 TTI2Q6NXR4 508 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 SAMD7Q7Z3H4 446 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 PPFIBP1Q86W92 1011 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 NUDT12Q9BQG2 462 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 MYMKA6NI61 221 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 RIOK3O14730 519 aaKnown RBP22.77■■□□□ 1.24
HPS3-206ENST00000486530 TBX3O15119 743 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 PLA2G6O60733 806 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 CCNE1P24864 410 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 PMS1P54277 932 aaKnown RBP22.77■■□□□ 1.24
HPS3-206ENST00000486530 ADKP55263 362 aaKnown RBP22.77■■□□□ 1.24
HPS3-206ENST00000486530 RASA3Q14644 834 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 Q4G0T1 1027 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 MIGA2Q7L4E1 593 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 CHURC1Q8WUH1 139 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 P2RX5Q93086 422 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 PANX2Q96RD6 677 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 OPLAHO14841 1288 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 TUBB4AP04350 444 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 STK4Q13043 487 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 ARHGAP27Q6ZUM4 889 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 P2RX7Q99572 595 aaKnown RBP22.77■■□□□ 1.24
HPS3-206ENST00000486530 TAB2Q9NYJ8 693 aa22.77■■□□□ 1.24
HPS3-206ENST00000486530 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
HPS3-206ENST00000486530 SMCHD1A6NHR9 2005 aa22.76■■□□□ 1.23
HPS3-206ENST00000486530 ASNSP08243 561 aa22.76■■□□□ 1.23
HPS3-206ENST00000486530 FAM160B2Q86V87 743 aa22.76■■□□□ 1.23
HPS3-206ENST00000486530 IRF2BP1Q8IU81 584 aa22.76■■□□□ 1.23
HPS3-206ENST00000486530 TEPSINQ96N21 525 aa22.76■■□□□ 1.23
HPS3-206ENST00000486530 RANBP17Q9H2T7 1088 aaKnown RBP22.76■■□□□ 1.23
HPS3-206ENST00000486530 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.76■■□□□ 1.23
HPS3-206ENST00000486530 TPM1P09493 284 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 FCER1AP12319 257 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 TNFAIP1Q13829 316 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 TRIM14Q14142 442 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 TBC1D10BQ4KMP7 808 aaPredicted RBP22.75■■□□□ 1.23
HPS3-206ENST00000486530 KCNK18Q7Z418 384 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 ETNPPLQ8TBG4 499 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 SYT17Q9BSW7 474 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 VPS16Q9H269 839 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 MAGEC2Q9UBF1 373 aaPredicted RBP22.75■■□□□ 1.23
HPS3-206ENST00000486530 ZSCAN12O43309 604 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 CIITAP33076 1130 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 KIAA0895Q8NCT3 520 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 GJA10Q969M2 543 aa22.75■■□□□ 1.23
HPS3-206ENST00000486530 NAA15Q9BXJ9 866 aaKnown RBP22.75■■□□□ 1.23
HPS3-206ENST00000486530 SRRTQ9BXP5 876 aaKnown RBP22.75■■□□□ 1.23
HPS3-206ENST00000486530 ASTN2O75129 1339 aaPredicted RBP22.74■■□□□ 1.23
HPS3-206ENST00000486530 RBL2Q08999 1139 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 ECM1Q16610 540 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 PRR16Q569H4 304 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 HAUS3Q68CZ6 603 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 CNGA4Q8IV77 575 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 FAM114A1Q8IWE2 563 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 CSGALNACT2Q8N6G5 542 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 CCDC51Q96ER9 411 aa22.74■■□□□ 1.23
HPS3-206ENST00000486530 DUSP9Q99956 384 aaKnown RBP22.74■■□□□ 1.23
HPS3-206ENST00000486530 MFAP3LO75121 409 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 CYP3A4P08684 503 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 LMNB1P20700 586 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 ZNF592Q92610 1267 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 DDX12PQ92771 950 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 LENG9Q96B70 501 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 FAM20AQ96MK3 541 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 FEM1BQ9UK73 627 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 STK24Q9Y6E0 443 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 TAL1P17542 331 aaPredicted RBP22.73■■□□□ 1.23
HPS3-206ENST00000486530 PSMD2Q13200 908 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 DYMQ7RTS9 669 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 CREBRFQ8IUR6 639 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 KIF18AQ8NI77 898 aa22.73■■□□□ 1.23
HPS3-206ENST00000486530 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
HPS3-206ENST00000486530 LGALS16A8MUM7 142 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 PHF20L1A8MW92 1017 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 HOXA13P31271 388 aaPredicted RBP22.72■■□□□ 1.23
HPS3-206ENST00000486530 KIF4BQ2VIQ3 1234 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 KIFC2Q96AC6 838 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 SLC39A2Q9NP94 309 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 HACL1Q9UJ83 578 aa22.72■■□□□ 1.23
HPS3-206ENST00000486530 GYPCP04921 128 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 EHHADHQ08426 723 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 ZYXQ15942 572 aaKnown RBP22.71■■□□□ 1.23
HPS3-206ENST00000486530 ANKRD40Q6AI12 368 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 GUF1Q8N442 669 aaKnown RBP22.71■■□□□ 1.23
HPS3-206ENST00000486530 ERMNQ8TAM6 284 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 MRPL11Q9Y3B7 192 aaKnown RBP22.71■■□□□ 1.23
HPS3-206ENST00000486530 GOLGA6L9A6NEM1 432 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 FAM86B1E9PN63 330 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 FAM86B2P0C5J1 330 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 IDEP14735 1019 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 UBXN1Q04323 297 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 SPIRE1Q08AE8 756 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 CENPPQ6IPU0 288 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 CCDC174Q6PII3 467 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 BMP2KQ9NSY1 1161 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms