RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 BRPF3Q9ULD4 1205 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 FRMPD4Q14CM0 1322 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 CNTNAP5Q8WYK1 1306 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 A6NJR5 290 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 GOLGA8AA7E2F4 631 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 GOLGA8BA8MQT2 603 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 SOX1O00570 391 aaPredicted RBP21.12■□□□□ 0.97
CLDN11-206ENST00000486429 ITGB8P26012 769 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 ARHGAP1Q07960 439 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 LY6KQ17RY6 165 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 LRIT3Q3SXY7 679 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 CCDC82Q8N4S0 544 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 SMARCC2Q8TAQ2 1214 aa21.12■□□□□ 0.97
CLDN11-206ENST00000486429 GRIN2DO15399 1336 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 hCG_1642624A0A1W2PR95 340 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 EPB41L2O43491 1005 aaKnown RBP21.11■□□□□ 0.97
CLDN11-206ENST00000486429 KPNA6O60684 536 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 CPA1P15085 419 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 RCAN1P53805 252 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 VSIG10LQ86VR7 867 aa21.11■□□□□ 0.97
CLDN11-206ENST00000486429 NAP1L2Q9ULW6 460 aaPredicted RBP21.11■□□□□ 0.97
CLDN11-206ENST00000486429 PIK3CDO00329 1044 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 CD4P01730 458 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 MMP3P08254 477 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 FPGSQ05932 587 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 KCNV1Q6PIU1 500 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 HEATR3Q7Z4Q2 680 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 AFG1LQ8WV93 481 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 LRCH3Q96II8 777 aa21.1■□□□□ 0.97
CLDN11-206ENST00000486429 DDX41Q9UJV9 622 aaKnown RBP21.1■□□□□ 0.97
CLDN11-206ENST00000486429 SCN10AQ9Y5Y9 1956 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 RGS20O76081 388 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 TIMP1P01033 207 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 RPS6KB1P23443 525 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 PSMA5P28066 241 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 USP17L6PQ6QN14 398 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 Q6ZUG5 572 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 GPKOWQ92917 476 aaPredicted RBP eCLIP21.09■□□□□ 0.97
CLDN11-206ENST00000486429 BRF1Q92994 677 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 PPP1R12CQ9BZL4 782 aa21.09■□□□□ 0.97
CLDN11-206ENST00000486429 CASTP20810 708 aaKnown RBP21.08■□□□□ 0.97
CLDN11-206ENST00000486429 EMID1Q96A84 441 aaPredicted RBP21.08■□□□□ 0.97
CLDN11-206ENST00000486429 PSTPIP2Q9H939 334 aa21.08■□□□□ 0.97
CLDN11-206ENST00000486429 MEIS2O14770 477 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 B4GALT4O60513 344 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 STAM2O75886 525 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 UBA1P22314 1058 aaKnown RBP21.07■□□□□ 0.96
CLDN11-206ENST00000486429 METAP2P50579 478 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLDN11-206ENST00000486429 APOBRQ0VD83 1088 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 GNPTABQ3T906 1256 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 FAM47CQ5HY64 1035 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 C9orf50Q5SZB4 431 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 MFSD5Q6N075 450 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 DHX37Q8IY37 1157 aaKnown RBP21.07■□□□□ 0.96
CLDN11-206ENST00000486429 ZFP91Q96JP5 570 aaPredicted RBP21.07■□□□□ 0.96
CLDN11-206ENST00000486429 TRPV6Q9H1D0 765 aa21.07■□□□□ 0.96
CLDN11-206ENST00000486429 ALDH8A1Q9H2A2 487 aaPredicted RBP21.07■□□□□ 0.96
CLDN11-206ENST00000486429 LAMA3Q16787 3333 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 FUT2Q10981 343 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 SHHQ15465 462 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 WWC2Q6AWC2 1192 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 PPP1R18Q6NYC8 613 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 PPTC7Q8NI37 304 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 INPP4AQ96PE3 977 aaPredicted RBP21.06■□□□□ 0.96
CLDN11-206ENST00000486429 HIPK3Q9H422 1215 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 NID2Q14112 1375 aa21.06■□□□□ 0.96
CLDN11-206ENST00000486429 CCDC196A0A1B0GTZ2 297 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 GGPS1O95749 300 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 TGFB3P10600 412 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 CDC27P30260 824 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 EPHB4P54760 987 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 NAPAP54920 295 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 MRPS9P82933 396 aaKnown RBP21.05■□□□□ 0.96
CLDN11-206ENST00000486429 PPIGQ13427 754 aaKnown RBP eCLIP21.05■□□□□ 0.96
CLDN11-206ENST00000486429 DGKDQ16760 1214 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 NBPF20Q3BBV1 942 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 PCNX4Q63HM2 1172 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 XRRA1Q6P2D8 792 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 NFRKBQ6P4R8 1299 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 FBXL16Q8N461 479 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 TMEM199Q8N511 208 aa21.05■□□□□ 0.96
CLDN11-206ENST00000486429 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
CLDN11-206ENST00000486429 FAM217BQ9NTX9 383 aaPredicted RBP21.05■□□□□ 0.96
CLDN11-206ENST00000486429 TRMT13Q9NUP7 481 aaKnown RBP21.05■□□□□ 0.96
CLDN11-206ENST00000486429 SPDYE3A6NKU9 549 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 FIBPO43427 364 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 SORBS3O60504 671 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 SUPT20HL2P0C7V6 817 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 CYP2C18P33260 490 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 CHMP4BP1P59074 171 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 PTPN11Q06124 597 aaPredicted RBP21.04■□□□□ 0.96
CLDN11-206ENST00000486429 UBE2SQ16763 222 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 CELF3Q5SZQ8 465 aaKnown RBP21.04■□□□□ 0.96
CLDN11-206ENST00000486429 SPATA33Q96N06 139 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 NOC4LQ9BVI4 516 aaKnown RBP21.04■□□□□ 0.96
CLDN11-206ENST00000486429 USP26Q9BXU7 913 aa21.04■□□□□ 0.96
CLDN11-206ENST00000486429 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms