RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 EPB41L4AQ9HCS5 686 aaPredicted RBP8.15□□□□□ -1.1
LTN1-206ENST00000486427 GPR27Q9NS67 375 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 CNOT6Q9ULM6 557 aaKnown RBP8.15□□□□□ -1.1
LTN1-206ENST00000486427 KCTD3Q9Y597 815 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 PI3P19957 117 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 IFRD2Q12894 506 aaPredicted RBP8.14□□□□□ -1.11
LTN1-206ENST00000486427 FAM209AQ5JX71 171 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 LRRC56Q8IYG6 542 aaPredicted RBP8.14□□□□□ -1.11
LTN1-206ENST00000486427 TMEM169Q96HH4 297 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 CHAMP1Q96JM3 812 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 TOX2Q96NM4 488 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 OSBPL2Q9H1P3 480 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 PPARGC1AQ9UBK2 798 aaKnown RBP8.14□□□□□ -1.11
LTN1-206ENST00000486427 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 IRAK3Q9Y616 596 aa8.14□□□□□ -1.11
LTN1-206ENST00000486427 SGSM2O43147 1006 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 BUB1BO60566 1050 aaPredicted RBP8.13□□□□□ -1.11
LTN1-206ENST00000486427 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
LTN1-206ENST00000486427 PMLP29590 882 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 RIOX2Q8IUF8 465 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 DCAF4Q8WV16 495 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 ALG3Q92685 438 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 EXOC2Q96KP1 924 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 CLDND1Q9NY35 253 aa8.13□□□□□ -1.11
LTN1-206ENST00000486427 ASXL2Q76L83 1435 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 H7BY64 318 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 ASGR2P07307 311 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 ATF2P15336 505 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 MC3RP41968 323 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 MROH9Q5TGP6 573 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 DCP2Q8IU60 420 aaKnown RBP8.12□□□□□ -1.11
LTN1-206ENST00000486427 CDC6Q99741 560 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 IRF2BPLQ9H1B7 796 aa8.12□□□□□ -1.11
LTN1-206ENST00000486427 TRBV23-1A0A0A0MS06 115 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 NUAK1O60285 661 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 LIMS1P48059 325 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
LTN1-206ENST00000486427 SLC9A5Q14940 896 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 STYK1Q6J9G0 422 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
LTN1-206ENST00000486427 SCUBE1Q8IWY4 988 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
LTN1-206ENST00000486427 ZBTB7AO95365 584 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 C6orf222P0C671 652 aaPredicted RBP8.1□□□□□ -1.11
LTN1-206ENST00000486427 SLC6A11P48066 632 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
LTN1-206ENST00000486427 CIAPIN1Q6FI81 312 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 LBX2Q6XYB7 198 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 FAM129CQ86XR2 697 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 SEC14L1Q92503 715 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 UBXN4Q92575 508 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 CDK11AQ9UQ88 783 aaPredicted RBP8.1□□□□□ -1.11
LTN1-206ENST00000486427 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
LTN1-206ENST00000486427 TRAF6Q9Y4K3 522 aa8.1□□□□□ -1.11
LTN1-206ENST00000486427 NCAM1P13591 858 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 PFKLP17858 780 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 FZD5Q13467 585 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 TARBP2Q15633 366 aaKnown RBP8.09□□□□□ -1.11
LTN1-206ENST00000486427 ZNF385BQ569K4 471 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 JAM3Q9BX67 310 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 RNF38Q9H0F5 515 aa8.09□□□□□ -1.11
LTN1-206ENST00000486427 GPR85P60893 370 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 SUMO1P63165 101 aaKnown RBP8.08□□□□□ -1.12
LTN1-206ENST00000486427 LONRF2Q1L5Z9 754 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 CNKSR3Q6P9H4 555 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 JMYQ8N9B5 988 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 ZSCAN18Q8TBC5 510 aaPredicted RBP8.08□□□□□ -1.12
LTN1-206ENST00000486427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
LTN1-206ENST00000486427 KISS1RQ969F8 398 aaPredicted RBP8.08□□□□□ -1.12
LTN1-206ENST00000486427 DACT3Q96B18 629 aaPredicted RBP8.08□□□□□ -1.12
LTN1-206ENST00000486427 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 DHRS4Q9BTZ2 278 aa8.08□□□□□ -1.12
LTN1-206ENST00000486427 MRPS23Q9Y3D9 190 aaKnown RBP8.08□□□□□ -1.12
LTN1-206ENST00000486427 RFXAPO00287 272 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
LTN1-206ENST00000486427 FOXO4P98177 505 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 CCDC144BQ3MJ40 725 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 MILR1Q7Z6M3 343 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 AMIGO3Q86WK7 504 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 IFNL3Q8IZI9 196 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 EPB41L1Q9H4G0 881 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 ZSWIM4Q9H7M6 989 aa8.07□□□□□ -1.12
LTN1-206ENST00000486427 ZSCAN22P10073 491 aaPredicted RBP8.06□□□□□ -1.12
LTN1-206ENST00000486427 GRK2P25098 689 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 GRK3P35626 688 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 KIZQ2M2Z5 673 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 EMC4Q5J8M3 183 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 STEAP3Q658P3 488 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 B3GNT8Q7Z7M8 397 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.06□□□□□ -1.12
LTN1-206ENST00000486427 CPA5Q8WXQ8 436 aa8.06□□□□□ -1.12
LTN1-206ENST00000486427 IPO9Q96P70 1041 aaKnown RBP8.06□□□□□ -1.12
LTN1-206ENST00000486427 SYT3Q9BQG1 590 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms